Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal2g1789 ATGAGTTGCTTATCATGTTTTTCCTCCCAAGAAAAAAAAGTAACAAAGAGGCCTAACAATGGAAATAGGACTGAATATTCTGCTGCTCCACCCAAGGAAGCACCATTCCAATCTCAGCAATGGCAAGATAATAATTATCACAATGCAAGGGCTAGTCCAAAAAGAGAACCTAGAACTAATAAAGAAGCCAACAAAGATACAGGGAACAATAACATTGCTGCACAAACATTCACATTCAGGGAATTGGCTTCTATTACAAGGAACTTTAGGCAAGAATGCCTAATAGGTGAAGGTGGATTTGGGAGAGTTTATAAAGGAAAAATTGAAAAAACCAATCAGTTCTTAAACTTTGTTGATATTGGTGAAAATTTGAAGGGTAAGGAAGTAGCTGTGAAGCAACTTGATAGGAATGGATTGCAAGGTAACAGAGAGTTTCTTGTTGAAGTGTTGATGTTGAGCCTCTTGCACCATCAAAATCTAGTGAGCTTGATTGGATATTGTGCTGATGGAGATCAGAGATTATTGGTATATGAGTACATGCCCTTAGGATCTGTTGAAGACCATCTACTTGGTAAGATTCTCCTTGGCTTTGTCATTGTATTCAACTTTCAAATGTCGATATTAGCGTTTGATATCGAGAAATATGTCACATCGAGAAGAAATGCAAAAAACCTTCATCCACAGCAAAAACCTCTAGATTGGTTCACCAGAATGAAAATAGCATTGGATGCTGCAAAAGGTCTAGAATATCTGCATGACAAGGCTAACCCTCCTGTCATCTACCGCGACTTGAAATCATCAAACATCTTGCTGGACAATGATTACAATGCAAAACTTTCGGATTTTGGACTAGCCAAGCTTGGACCAACCGGGGAAGATTCTCATGTCTCGTCAAGAGTAATGGGTACTTATGGATACTGTGCTCCCGAGTATCAAAGAACTGGTCAGATCACTGTAAAATCGGATGTATATAGCTTCGGAGTTGTTTTACTCGAATTAATCACCGGAAGGAGAGCCATTGACAACACAAGGCCTTCATTAGAGCAAAATCTAATTTCTTGGGCATATCCAGTATTCAAAGACCGTCATCGATACCCGGAATTAGCAGATCCCCTTCTCGAGCAAAACTTTCCGATGAGATCACTTGATCAAGCAGTAGCCGTAGCAGCCATGTGCCTCAACGAGGAACCATCGGTGAGGCCCTTGATTAGTGATGTAGTCACTGCCCTTAGTTTCCTTGGGACTCAAGACCCTGCACTACTTCCATCTATTGACATACCCTCTTCGCCGCGACAAGAGCAAGAAGCTAATGATGCATCAACATTGAATCTTCTCGACAATGATAGTGTTATGGAACGCCAAAGAGCGGTTGCTGAAGCCATCGAATGGGGTTCAAATTCTAGGAACAAAGCTGCGAATCTGCGTCAAAATGGTTCCTCTTTGCAAATCCACTACAATTGCATACACAATGATTAG 1476 0.4099 MSCLSCFSSQEKKVTKRPNNGNRTEYSAAPPKEAPFQSQQWQDNNYHNARASPKREPRTNKEANKDTGNNNIAAQTFTFRELASITRNFRQECLIGEGGFGRVYKGKIEKTNQFLNFVDIGENLKGKEVAVKQLDRNGLQGNREFLVEVLMLSLLHHQNLVSLIGYCADGDQRLLVYEYMPLGSVEDHLLGKILLGFVIVFNFQMSILAFDIEKYVTSRRNAKNLHPQQKPLDWFTRMKIALDAAKGLEYLHDKANPPVIYRDLKSSNILLDNDYNAKLSDFGLAKLGPTGEDSHVSSRVMGTYGYCAPEYQRTGQITVKSDVYSFGVVLLELITGRRAIDNTRPSLEQNLISWAYPVFKDRHRYPELADPLLEQNFPMRSLDQAVAVAAMCLNEEPSVRPLISDVVTALSFLGTQDPALLPSIDIPSSPRQEQEANDASTLNLLDNDSVMERQRAVAEAIEWGSNSRNKAANLRQNGSSLQIHYNCIHND 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal2g1789 491 Gene3D Transferase(Phosphotransferase) domain 1 222 419 - -
Lal2g1789 491 ProSitePatterns Serine/Threonine protein kinases active-site signature. 259 271 IPR008271 GO:0004672|GO:0006468
Lal2g1789 491 PANTHER SERINE/THREONINE-PROTEIN KINASE PBL26-RELATED 2 473 - -
Lal2g1789 491 MobiDBLite consensus disorder prediction 427 445 - -
Lal2g1789 491 ProSiteProfiles Protein kinase domain profile. 89 413 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal2g1789 491 SMART serkin_6 89 413 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal2g1789 491 Gene3D Phosphorylase Kinase; domain 1 59 179 - -
Lal2g1789 491 MobiDBLite consensus disorder prediction 49 63 - -
Lal2g1789 491 MobiDBLite consensus disorder prediction 1 70 - -
Lal2g1789 491 MobiDBLite consensus disorder prediction 423 445 - -
Lal2g1789 491 SUPERFAMILY Protein kinase-like (PK-like) 75 437 IPR011009 -
Lal2g1789 491 CDD STKc_IRAK 95 410 - -
Lal2g1789 491 Pfam Protein tyrosine and serine/threonine kinase 93 409 IPR001245 GO:0004672|GO:0006468
Lal2g1789 491 MobiDBLite consensus disorder prediction 1 26 - -
Lal2g1789 491 PANTHER OS07G0668900 PROTEIN 2 473 - -
Lal2g1789 491 MobiDBLite consensus disorder prediction 33 48 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal2g1789 Lal-Chr2 20152148 20155980 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal2g1789 1 473 Glycoside Hydrolase AT3G07070 58.105 0.0 519
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Lal2g1789 PK_Tyr_Ser-Thr 2.9e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal2g1789 - - gmx:100786405 662.914