Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal2g1776 ATGGAAGATTGCCAAAGGATCATAATTTATAATCAAATGTCAAGTTTGGACAACAATCGAGAAAGACTAGCTGGCTTGACCCTTGATGATGTTTTAGCAAATCAAAAGAGATTATCTAGCACACCACCCAAAGAATCAAAAAGTCGAACCCTCCTAGATATCATCAAAGAAGACGAGAGCAACAAAAAGGATCGCAGATCGTGGAAAGCTTTTCAGGACACGCTTAGACTAAAGCTAGCAGGCTCTGCTTGGAGATCATCAATTCACATTCCAACTTCGGATCCAGTTATTCCTATTCCTATTCCTACTCCTACGGAACCAAACAGCAGAAACAACCATTTTCAACCCATGTCAAATAACTATGACGCATCCCAAGTTGATGATCTCAACCCTTACGACCCCGATTCTTCTTTGGCGCCGCCACCCAGGGCACAGTTCTCTCGACGGAGCTCCACCCGTTACGGATCTCCGGCTGACTCTCCCGATGACACCGCAAGTGGAGGAGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGCAGGACTTCTCAGGCCACAATTATCACGTAGAAACTCCACCACCGTGCCGTCTCAGTCAGAGCCATTCCGGCGAGGGAGGGTGGTGACATTCCGAGACAATTTCGACGACGATGATTCCGACGATGAAGGGAACCAAAGTGTAGAGAGGACAATGTCAGCAAGGGAGGCAGTGGCGGCGCAGGAGGCGTCAGAGGCGGCGGCTGCAGAAGCGGAGATGGCGGCGGAGGAAGAAGAGAGACCAATGACAATGTCATTGATGGATTTGTTAGAAGAAACTGATAGGGAAATGGGTCTTGAAGGATCAAGGTATATATTAAGTGATGATGAAGATTTCGATGAAGACGATGACGAAGAAAATGATGATGACGATGATGATAATAACGACCGAGAAGGTGTTATGGAATATACTTGTTGTGTTTGTATGGTGAAGCATAAAGGTTCTGCTTTTATACCTTGTGGTCACACTTTTTGCAGAATGTGTTCAAGGGAGCTTAATGTTAGTAGAGGGAATTGCCCTCTTTGCAACAATTTCATTTTGGAGATTCTTGACATTTTCTGA 1098 0.4617 MEDCQRIIIYNQMSSLDNNRERLAGLTLDDVLANQKRLSSTPPKESKSRTLLDIIKEDESNKKDRRSWKAFQDTLRLKLAGSAWRSSIHIPTSDPVIPIPIPTPTEPNSRNNHFQPMSNNYDASQVDDLNPYDPDSSLAPPPRAQFSRRSSTRYGSPADSPDDTASGGGGGGGGGGGGGAGLLRPQLSRRNSTTVPSQSEPFRRGRVVTFRDNFDDDDSDDEGNQSVERTMSAREAVAAQEASEAAAAEAEMAAEEEERPMTMSLMDLLEETDREMGLEGSRYILSDDEDFDEDDDEENDDDDDDNNDREGVMEYTCCVCMVKHKGSAFIPCGHTFCRMCSRELNVSRGNCPLCNNFILEILDIF 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal2g1776 365 CDD RING-HC 317 354 - -
Lal2g1776 365 PANTHER OS01G0917900 PROTEIN 8 365 - -
Lal2g1776 365 MobiDBLite consensus disorder prediction 186 200 - -
Lal2g1776 365 MobiDBLite consensus disorder prediction 89 234 - -
Lal2g1776 365 PANTHER OS01G0917900 PROTEIN 8 365 - -
Lal2g1776 365 MobiDBLite consensus disorder prediction 106 126 - -
Lal2g1776 365 SUPERFAMILY RING/U-box 316 361 - -
Lal2g1776 365 MobiDBLite consensus disorder prediction 143 159 - -
Lal2g1776 365 Pfam Zinc finger, C3HC4 type (RING finger) 315 358 - -
Lal2g1776 365 SMART ring_2 317 354 IPR001841 -
Lal2g1776 365 ProSiteProfiles Zinc finger RING-type profile. 317 355 IPR001841 -
Lal2g1776 365 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 291 365 IPR013083 -
Lal2g1776 365 MobiDBLite consensus disorder prediction 286 308 - -
Lal2g1776 365 MobiDBLite consensus disorder prediction 283 308 - -
Lal2g1776 365 Coils Coil 238 259 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal2g1776 Lal-Chr2 20027601 20029646 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal2g1776 13 365 C3H Transcription Factor Family AT3G07120 37.467 4.36e-57 188
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal2g1776 - - lang:109359938 399.823