Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal2g1737 ATGGCGATCAAAGATTCATCAATGGAGCTTCACGAAATTAGCACAGAAACTGAAGGATCCAACACAGATTCTGACTGGGAGGGTTCCGAAGAAGACACTGATTTCGAAGAAACCCATGACAAGTTTTCAAACCTCTCCCTCAAGACCAAAGAAAAATCGAAGGTTGTTGAAAATAAGGGTCTGGGTACTGAGACTGAGGTAGAAGTGTTGAAGGCTGATGAAAATTTTGAGAAGGTTCAGAAAATGATTGAAGATGGGGTGCCAGAGAAATTGAAGGTGGGTGAATGCAAGTTGTATTTGAGGAATTACGGTCTGAGGCTCACCGGAAACAAGGAAACACTCATCCAACGCGTAAAGGAACATCTCGAGATCATAAAGGGTGGAGGCGAGAAAAGGTACCCACCTTCTAGCTTTGTATTGAATTGTAAAGGTGATGCGTGCACTGGCGATGTTGTTTTGTTTGAGCAGAATGTTTATGAAATGTATAACCTAGCATCCAGGAGTGCCAGTGGCCCACCTTGTGGAATAAGGATAGTTGCAGGCCGCATAGTGAAAGAAAGCTATGGTGCTGCCAAACAACAGCATACATTTACAATCGAAGTACTGTGGAGCAAGGGAGAAAAGCCTTTCCCTCCTCTTCATCCCCTATTGATCAAGGGCCGTAATCTTTATAGGCTGAAGACTTTGAGACAGAAATGGGAAGACGAAAGGGAAAGGCAGAAAATATTGTTTGAAAAACACTCAAGGGGAACTGTTGCTAGGGGAAACAGAGAAGCAAGAATGCAAGAAAAGGAGAGGAGAAAGAAACCCAGTGAAAATAGGGTCTCCAATAAGAATTCAGTAAGGAACCAAAATCAACCACATCCACACATGGCAACTTCACAATATCAACCTCAAAAAATCGATATTCTCATTAATCCTAAGAACCCAGAATTTCGATCTGCTATTGTAAATAAACCAGCAGCCATAACTCTACAACAATATGGTAAGCCATTTGATTCTACAAGAGAGGCAATGAGATTCACTGATTCAGGAATGAGACCATTTCCTCCTCCTCACTACATACATAATCAGCAAGCTCGGTTTCAGTTCTCCGATCCTCGCGGGAGTTCTTTCATTAGCGACAAAATCGGCAGAGCAAACTACAATTTCCCTTATCACAGAATGCCTTTGGGAAGTGCAAATCATTGTATTCCATTGAGGCCTGGCAGAGAAAGTTGGGAGCAAAAACAGTTGTGTAGAGATTATGCACATGGGAGGTGTTATTTTGGGGACAAGTGCAAATATTTACATGACATGAGATAA 1305 0.4215 MAIKDSSMELHEISTETEGSNTDSDWEGSEEDTDFEETHDKFSNLSLKTKEKSKVVENKGLGTETEVEVLKADENFEKVQKMIEDGVPEKLKVGECKLYLRNYGLRLTGNKETLIQRVKEHLEIIKGGGEKRYPPSSFVLNCKGDACTGDVVLFEQNVYEMYNLASRSASGPPCGIRIVAGRIVKESYGAAKQQHTFTIEVLWSKGEKPFPPLHPLLIKGRNLYRLKTLRQKWEDERERQKILFEKHSRGTVARGNREARMQEKERRKKPSENRVSNKNSVRNQNQPHPHMATSQYQPQKIDILINPKNPEFRSAIVNKPAAITLQQYGKPFDSTREAMRFTDSGMRPFPPPHYIHNQQARFQFSDPRGSSFISDKIGRANYNFPYHRMPLGSANHCIPLRPGRESWEQKQLCRDYAHGRCYFGDKCKYLHDMR 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal2g1737 434 ProSiteProfiles SAP motif profile. 88 122 IPR003034 -
Lal2g1737 434 MobiDBLite consensus disorder prediction 1 42 - -
Lal2g1737 434 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEI 5 433 IPR045124 GO:0003723|GO:0045892
Lal2g1737 434 SUPERFAMILY CCCH zinc finger 408 432 IPR036855 GO:0046872
Lal2g1737 434 Pfam SAP domain 89 122 IPR003034 -
Lal2g1737 434 Pfam CCCH-type zinc finger 412 432 IPR041367 -
Lal2g1737 434 MobiDBLite consensus disorder prediction 276 295 - -
Lal2g1737 434 SMART c3hfinal6 407 433 IPR000571 GO:0046872
Lal2g1737 434 MobiDBLite consensus disorder prediction 244 295 - -
Lal2g1737 434 ProSiteProfiles Zinc finger C3H1-type profile. 407 434 IPR000571 GO:0046872
Lal2g1737 434 MobiDBLite consensus disorder prediction 244 275 - -
Lal2g1737 434 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 62-LIKE 5 433 - -
Lal2g1737 434 Gene3D - 402 434 - -
Lal2g1737 434 SUPERFAMILY SAP domain 78 123 IPR036361 -
Lal2g1737 434 SMART sap_9 88 122 IPR003034 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal2g1737 Lal-Chr2 19722920 19726637 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Lal2g1737 SAP 8.4e-09 CL0306
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal2g1737 - - gmx:100815642 527.709