Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal2g1714 ATGTTTATTAAACAAGCTAATCATACCCAAAATGAAGTCAATTTTGATCCATCAATTGGATCATCAAATAGGGACAATCCTCCATCACCCATTAATGGAAGTAATGAATGCTTAATAGATGAACAATCTGGGCTAAACAATAATCTACCTAATCAAGAAAACCCTAACATTGTGAATCATCCCAATGTTGAAGCATCTACTTTCCCTAGCCCTATGCAAAGTTCACAAGAAATGGATTACTCTATTATGGTGCAACCAAGTTCTTTGCCAACATCTGGTATTAATGCTGAAATCAATTCTGCACCTGAATTCTTATCAAATTCTTCTTTAATTCCTAATAATACTAGAGGTGAAGTAGAATTTCGGCATGCTCTATTGGAACATCTACGTGCTGGTGGAAGTTTGCAAGTTGAGGGGCTTGAAGATCAGGAAGAAGATCAAAATGAAAATAATGAGAATATGGAAATGATGGGTGAAGAAGAAGAAGAAGATGATGAGGGAATGTGGTTGACTAAGGAAGAGATCATGACATCAATTGGGCATGAAACAATTGACTTTGCTGTTGAGGATACCCAAGAAAAAGAAGTTTGTGACATTTGTCAGGATGGCTATGTGAAAGGAGATAAGGTTGGGAGGTTAGACTGTTCCCACAAATTCCATATTGGTTGCATCAGTACCTGGCTTGTGCGCAAAAACATTTGTCCCAAATGCAGAAGAATGGCTCTATTACCTATTTATGTTGACTATACTTCATAA 756 0.369 MFIKQANHTQNEVNFDPSIGSSNRDNPPSPINGSNECLIDEQSGLNNNLPNQENPNIVNHPNVEASTFPSPMQSSQEMDYSIMVQPSSLPTSGINAEINSAPEFLSNSSLIPNNTRGEVEFRHALLEHLRAGGSLQVEGLEDQEEDQNENNENMEMMGEEEEEDDEGMWLTKEEIMTSIGHETIDFAVEDTQEKEVCDICQDGYVKGDKVGRLDCSHKFHIGCISTWLVRKNICPKCRRMALLPIYVDYTS 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal2g1714 251 MobiDBLite consensus disorder prediction 138 166 - -
Lal2g1714 251 SUPERFAMILY RING/U-box 196 243 - -
Lal2g1714 251 SMART ring_2 197 237 IPR001841 -
Lal2g1714 251 Coils Coil 137 160 - -
Lal2g1714 251 PANTHER E3 UBIQUITIN-PROTEIN LIGASE HIP1-RELATED 9 242 - -
Lal2g1714 251 MobiDBLite consensus disorder prediction 1 75 - -
Lal2g1714 251 Pfam Ring finger domain 197 238 IPR001841 -
Lal2g1714 251 MobiDBLite consensus disorder prediction 139 166 - -
Lal2g1714 251 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF165 9 242 IPR045191 GO:0061630
Lal2g1714 251 ProSiteProfiles Zinc finger RING-type profile. 197 238 IPR001841 -
Lal2g1714 251 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 183 243 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal2g1714 Lal-Chr2 19462586 19464960 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal2g1714 125 242 C3H Transcription Factor Family AT2G15530 32.374 3.81e-14 69.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal2g1714 - - lang:109350511 124.79