Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal2g1700 ATGCATCAGAAGAAATCAGAAATCCAGATCGGAAAAGAAAGCATTGGCGTCTCTTCCGATTTTAATCCAATTCCTTTCCCTTCTTCTTCTATTCACCAAAAATTCCATACCCATAATCACTTTTTTCCACAATCACTTATTCCCAACACTACCCATAATGATTTACTATCAAATAATCATCAACAACCTTCAGCTTTTAATCATAATCATAAAATTCCTTTTATTTCAAACAACACCGCTTTTTTCTCCGTCACAATCGCCGCAAAAAGTGTTCTTTTTCACCTCCTCCGCCGTATCAAACACCTCCGCCGCTTCCACCTCCGTCTCATCCTCCTCCTCTCTCTCCCCTTCTTTTACTTCCTCGTATCTCACCCAACCCATTCATTACTTCTCGATTTCCTCTCCGCTTTCGCCTTCTCCGCCGTGCTCCTCCTCTCTCTCAACCTTGCCCTCCCCCGTTTCCCCTCAATCCGCCTCTTCCTCGCCCGCTCGCTGAAACCCTCTTCCGCTTCTCGCCCCGCGCCGCCGCTCCCCGTGTTTTGGACAATTGGGTCACGGCGGCGGTCGGAGAAGACGGCGGCGCCGGCAGCCTCATCGGGGTGTTGGGTTCAGGTGTATGGTAATGGGGATGTGTATGAAGGTGAATTTCATAAGGGGAAGTGTTCAGGGAGTGGTGTGTATTATTATAGTATGAGTGGAAGGTATGAAGGTGATTGGGTTGATGGTAAGTATGATGGGTATGGGGTCGAGACTTGGGCTCGGGGAAGCCGATATCGCGGTCAATATCGAAATGGGTTGAGGAATGGGTTTGGTGTGTATAGGTTTTACACTGGTGATGTTTATGCTGGTGAGTGGTCTAATGGCCAGAGTCATGGATGTGGAATTCATACTTGTGAGGATGGGAGTAGGTATGTTGGAGAATTCAAATGGGGTGTTAAGCATGGCCTTGGTCATTACCATTTCAGAAACGGGGATACCTATGCCGGTGAATATTTTGCGGACAAGATGCACGGGTTTGGAGTATATCGTTTTGCAAATGGTCATCGATACGAAGGAGCTTGGCATGAAGGAAGAAGGCAAGGACTTGGAATGTACACATTTAGAAACGGAGAAACCCAATCTGGTCACTGGCAAAATGGAGTCCTCGACATTCCAAGCACCCAGAGTACCACTTATCCGGTTTCTGCTGTTGGTGTCTATCATTCCAAAGTACTCAATGCAGTGCAGGAAGCAAGACGAGCAGCTGAGAAAGCCTACGACGTGACCAAGGTAGACGAAAGGGTGAATAGAGCAGTAGCAGCTGCTAATAGAGCAGCCAATGCAGCTCGAGTAGCTTCCGTCAAGGCTGTGCAAAAGCGAATGCATCATGTTAACCACGAAAGCTTCCCACTTCCTATAGTATAA 1404 0.4751 MHQKKSEIQIGKESIGVSSDFNPIPFPSSSIHQKFHTHNHFFPQSLIPNTTHNDLLSNNHQQPSAFNHNHKIPFISNNTAFFSVTIAAKSVLFHLLRRIKHLRRFHLRLILLLSLPFFYFLVSHPTHSLLLDFLSAFAFSAVLLLSLNLALPRFPSIRLFLARSLKPSSASRPAPPLPVFWTIGSRRRSEKTAAPAASSGCWVQVYGNGDVYEGEFHKGKCSGSGVYYYSMSGRYEGDWVDGKYDGYGVETWARGSRYRGQYRNGLRNGFGVYRFYTGDVYAGEWSNGQSHGCGIHTCEDGSRYVGEFKWGVKHGLGHYHFRNGDTYAGEYFADKMHGFGVYRFANGHRYEGAWHEGRRQGLGMYTFRNGETQSGHWQNGVLDIPSTQSTTYPVSAVGVYHSKVLNAVQEARRAAEKAYDVTKVDERVNRAVAAANRAANAARVASVKAVQKRMHHVNHESFPLPIV 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal2g1700 467 SUPERFAMILY Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 277 380 - -
Lal2g1700 467 PANTHER PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE RELATED 31 458 - -
Lal2g1700 467 SUPERFAMILY Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 206 311 - -
Lal2g1700 467 Pfam MORN repeat 327 349 IPR003409 -
Lal2g1700 467 Pfam MORN repeat 281 303 IPR003409 -
Lal2g1700 467 Pfam MORN repeat 304 326 IPR003409 -
Lal2g1700 467 Pfam MORN repeat 350 371 IPR003409 -
Lal2g1700 467 Pfam MORN repeat 235 257 IPR003409 -
Lal2g1700 467 Pfam MORN repeat 258 280 IPR003409 -
Lal2g1700 467 Pfam MORN repeat 212 232 IPR003409 -
Lal2g1700 467 SMART morn 210 231 IPR003409 -
Lal2g1700 467 SMART morn 279 300 IPR003409 -
Lal2g1700 467 SMART morn 256 277 IPR003409 -
Lal2g1700 467 SMART morn 302 323 IPR003409 -
Lal2g1700 467 SMART morn 348 369 IPR003409 -
Lal2g1700 467 SMART morn 325 346 IPR003409 -
Lal2g1700 467 SMART morn 233 254 IPR003409 -
Lal2g1700 467 PANTHER - 31 458 - -
Lal2g1700 467 Gene3D - 333 400 - -
Lal2g1700 467 Gene3D - 242 286 - -
Lal2g1700 467 Gene3D - 287 332 - -
Lal2g1700 467 Gene3D - 197 241 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal2g1700 Lal-Chr2 19320319 19323913 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal2g1700 204 398 Acyl Lipid Metabolism Gene Families AT2G41210 34.359 1.03e-29 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal2g1700 - - lang:109361368 655.21
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal2g1700 2 19320319 19323913 Lal14g0840 14 10574355 10577380 PCT
Lal2g1700 2 19320319 19323913 Lal19g0265 19 2657859 2660873 PCT