LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lal2g1698	ATGGAGCAACCAGAAATGGCTACTGAAGAAGCCTTTGAAACTCCGAAGAAAGAAGAAGTTAAGGCCAAACATTTCCAGAGGGATTGTGGTGGAAAAGTTGTTTCTTTTCTGAAAGATTCTTTAAGAAGTTCATATGAGTCAAGGTGGTGGAAAAGTTGCAACCATGGAATGCATAAAAGAAAGAAGAACAACAACAATTCTGGTGTGTTTCATGACATAGATGGTGTTCAAGTTTCTTTAAAGATTGGTAGGGAAAATCCAAGGATTTTCAGCTATGCAGAGCTTTTCATAGGATCAAATGGTTTCAATGAAGATGAAGTTGTTGGAAGTGGAGGATTTGGCAAAGTTTATAAGGCTGTTTTGCCAAGTGATGGAACTATTGTTGCTGTCAAATGTTGTTTAGCAGAGAAAGGGAAGCAATTTGATAAGAGTTTTGCTGCAGAGTTGAGAGCGGTTGCCGATCTTCGCCATAGGAACCTTGTCAGGTTGAGAGGTTGGTGTGTTCATGAAGATCAGTTGTATCTTGTTTATGATTATATGCCTAATCGCAGCCTCGACCGGAAACTTTTCCGAAGGAATGAGAATTTGAAGGTAGAGCCTCTTAGTTGGGGACATAGGGTGAAAATTGTGAAAGGTTTGGCAGCTGCATTGTATTATCTTCATGAACAATTAGAAACTCAAATCATTCATAGGGATGTGAAAACCAGCAATGTGATGCTTGATTCTCATTACAATGCTCGGTTAGGTGACTTTGGCATGGCAAGGTGGCTAGAACATGAGATTGAGTACAAGACAAGGAAAACATCAGCCAGAGTTGATCAGTTTCGGTTGGGAGAGACATCGAGAATTGGTGGCACGATTGGCTATCTTCCGCCTGAAAGCTTGGAGAGACCGAGAAATTGTACCTCCAAATCAGATGTCTTTAGCTTTGGGATAGTTGTGCTAGAGGTGGTATCCGGAAGGAGGGCGATAAATCTCACATACCCTGATGACCAAATCATTTTGCTTGATTGGATTAGAAGGCTTTCTGACGAAGGGAAGCTTCTTGAGGCAGGCGATGCTCGGCTACCGGACGGTTCCTACAAGCTGAATGAGATGCAGCATCTGATTCATATTGGCCTTATCTGCACATTCCATGACCCGCAATTGAGGCCAAGCATGAAATGGATTGTGGAAGCACTTTCTGACTTTTCTTTCAAATTACGAACACTCCCTTCATTTCAATCAAGTCCTCTATACATCTCTTTGTCTTCATCCCCATACGAGACTAGTCGTAGCAGCAAGAGTTGCACTAGAACTTCCACAGAGAATGCTAGCATGATCTCAAACTACACTTCATCCAACTATGTCACAGCTGCAAGTGAAACTGTATATGTAACTGCTGAACACAAAAACAGCGAAACCATCTCTTCTAAGAGAATGCAGCATAACCAGCGACCGTTTCCCGGGTTTGAAACTCCGAGGGAAATATCATACAAGGAGATAGTTTCAGCTACAGATAACTTCTCAGACTCAAAAAGGGTGGCAGAGCTAGACTTTGGAACCGCTTATCACGGCATCCTTGATGGAAATTGCCATGTTTTGGTGAAGCGCCTAGGGATGAAAACATGTCCTGCGTTGCGTGATAGATTCTCCAACGAACTCAGGAATCTAGGAAGGCTTCACCATAGGAACTTGGTGCAACTTCGTGGTTGGTGTACCGAGCAAGGAGAGATGCTTGTTGTTTATGATTATTCAGCTAGTAGAATTATGAGTCAACTACTTTTCCATCATAAAAATGGCAGCATCGGGAATCCGATCCTCCAATGGCATCATAGATATAACATATTGAAATCACTTGCTTCTGCAATTCAATATCTGCATGAGGAATGGGAGGAACAAGTCATTCATAGAAACATTACCTCTTCAGCTGTAATTCTCGAACCAGACATGAACCCGAGACTTGGCAGTTTTGCTCTAGCTGAGTTTTTGTCGAGAAATGAGCACGGTCATCATACAGTCACCGACACTAGCAAATCAGTTCGCGGGATTTTTGGCTATATGTCACCAGAATATGTGGAATCTGGTGAAGCAACCGTTGCAGCCGATGTTTATAGCTTCGGGGTGGTGGTCCTTGAAGTTGTAAGTGGACATATGGCCGTTGATTTCAGGCAGCCAGAGGTACTATTGGTGAAGAAGGTTCATGAATTTGAGATGAGAAAAAGACCATTGAAGGAGTTAGCAGATATAAGACTCAATGGAGAGTATAATGATAAAGAACTAATGAGATTGGTAAGATTAGGAATTGCTTGCACCAGTTGTAACCCACAATTAAGACCATGCATGAGACAAATAGTAAGCATTCTTGATGGCAATGACAAATTACTCATACAAAGAAGCAAAGAGAGCATAGAAGAATGGAAACAAAGAAATGCTAGTTCCTTGTCATTGGTTAAGAGAATTCAAGGTCTAGGAATACAGTAA	2463	0.4182	MEQPEMATEEAFETPKKEEVKAKHFQRDCGGKVVSFLKDSLRSSYESRWWKSCNHGMHKRKKNNNNSGVFHDIDGVQVSLKIGRENPRIFSYAELFIGSNGFNEDEVVGSGGFGKVYKAVLPSDGTIVAVKCCLAEKGKQFDKSFAAELRAVADLRHRNLVRLRGWCVHEDQLYLVYDYMPNRSLDRKLFRRNENLKVEPLSWGHRVKIVKGLAAALYYLHEQLETQIIHRDVKTSNVMLDSHYNARLGDFGMARWLEHEIEYKTRKTSARVDQFRLGETSRIGGTIGYLPPESLERPRNCTSKSDVFSFGIVVLEVVSGRRAINLTYPDDQIILLDWIRRLSDEGKLLEAGDARLPDGSYKLNEMQHLIHIGLICTFHDPQLRPSMKWIVEALSDFSFKLRTLPSFQSSPLYISLSSSPYETSRSSKSCTRTSTENASMISNYTSSNYVTAASETVYVTAEHKNSETISSKRMQHNQRPFPGFETPREISYKEIVSATDNFSDSKRVAELDFGTAYHGILDGNCHVLVKRLGMKTCPALRDRFSNELRNLGRLHHRNLVQLRGWCTEQGEMLVVYDYSASRIMSQLLFHHKNGSIGNPILQWHHRYNILKSLASAIQYLHEEWEEQVIHRNITSSAVILEPDMNPRLGSFALAEFLSRNEHGHHTVTDTSKSVRGIFGYMSPEYVESGEATVAADVYSFGVVVLEVVSGHMAVDFRQPEVLLVKKVHEFEMRKRPLKELADIRLNGEYNDKELMRLVRLGIACTSCNPQLRPCMRQIVSILDGNDKLLIQRSKESIEEWKQRNASSLSLVKRIQGLGIQ	820

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lal2g1698	820	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	228	240	IPR008271	GO:0004672\|GO:0006468
	Lal2g1698	820	CDD	STKc_IRAK	513	784	-	-
	Lal2g1698	820	SMART	serkin_6	102	399	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lal2g1698	820	Gene3D	Phosphorylase Kinase; domain 1	454	578	-	-
	Lal2g1698	820	Gene3D	Transferase(Phosphotransferase) domain 1	180	402	-	-
	Lal2g1698	820	Pfam	Protein tyrosine and serine/threonine kinase	508	781	IPR001245	GO:0004672\|GO:0006468
	Lal2g1698	820	Pfam	Protein kinase domain	102	391	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lal2g1698	820	Gene3D	Phosphorylase Kinase; domain 1	75	179	-	-
	Lal2g1698	820	PANTHER	RECEPTOR LIKE PROTEIN KINASE S.2	53	818	-	-
	Lal2g1698	820	ProSiteProfiles	Protein kinase domain profile.	502	789	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lal2g1698	820	Gene3D	Transferase(Phosphotransferase) domain 1	584	807	-	-
	Lal2g1698	820	SUPERFAMILY	Protein kinase-like (PK-like)	477	782	IPR011009	-
	Lal2g1698	820	SUPERFAMILY	Protein kinase-like (PK-like)	86	424	IPR011009	-
	Lal2g1698	820	ProSitePatterns	Protein kinases ATP-binding region signature.	108	131	IPR017441	GO:0005524
	Lal2g1698	820	PANTHER	-	53	818	-	-
	Lal2g1698	820	ProSiteProfiles	Protein kinase domain profile.	102	398	IPR000719	GO:0004672\|GO:0005524\|GO:0006468

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lal2g1698	Lal-Chr2	19299982	19302444	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lal2g1698	485	797	Receptor kinase-like Gene Family	AT3G53380	34.579	2.01e-54	199

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_L-LEC	Lal2g1698		Pkinase	6.9e-44	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lal2g1698	-		-	lang:109352493	1512.28