Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal2g1693 ATGGATTCCACTAACTATGTTGCTAAGAGGACCCGTAGCAAGAAATTTTCACACATTATGAAGTCCTTCAATGGAAAATTCAAACCTGATTTCCAGTTTCTCGGTGAAGAAAGCATTTTCGACAAAGAAGTAATTGGTTCTGTTTCTTCATCTATGGTAAGGGATAGAGAAATAGGCACGAGTTTGAAGGGTGAAGAAAAAGTTGGTTTTTTAGAAGATGATGATTCTGTTTCATTGGGTGGTGTAAAAATTGTATCTTTTTCTGAAAAAAGGAAGAATAATCGTTTGAAGGGTAAAAGGGTTGTTGAAAGTGAACCTGATTTTGTGTTTTTGGGAGAAGATGAAGATGGGTGTGAATTTTCATCTGGTATTGGTAGTAAACAAATGAGGAGAATGTTTGAGGATAATCCAGAACCTGCAGATTTTATTGAAATTGATGATAGTGATGCTGATGATAGTGTTGATGTTAATGGATTTGAGCATTGCGAAAAGAAGAGGTTTGATGATGCTGTTGATGGTAATGGTGGACCTGAAAACCGTGTTCACATTCATTTGGATGAAGTTAGAAACAGTGAGGAAGAAGAAGATGATGGAGTGAGTGAAAGTGTTTCGGAATTTGACACTGAAAATGATGAGTCTAGTGATGAAGACTTCCAAGTTGATGATGATAGGGAAATCTCAAGTAATGAAGATGATTCAACCTTTGATGATGATAAGAAAGGAAGTGATAGATGTAGAAAGAGAGTTCGTCGAAACGTGTCATTGCATAAGGAGACAATTGATTCAGCTACGATCTTAGAAAGCAGAGAACATGAAAACAAAAGAGGAGACAACAAAGACTGTGAGAAAACTGATGCTAGTGCTAATGAATGTGTGGATGTTGATACTCAGGGAGGACTTCCATCTAAGTGTTTTTGGGAAAAGGCTGAAGAACCAGTCGATAAATCGGAGTTGAATATGTTGTGGGAAGAAATGGATTGTGAGCTTAGATCAGAAGAAGTTGATTCCCCGGTTGGCAATGCAAGAGCAGATGAGGCAGAACAAAGTAGAGTAAATCCAACCAACTTTTCTAAGCATTCCAAGAATCTTGATAAAAGAGAAGAGCATCCTAACAAAGGCGCTCGTGTGGTTGACAATGCAAGGACAAATGAAGCAGAACAAAGTAGAGGGAAGCAAACCAACCTTTGTGAGCATGACATGAATCTTCATAAAGGAAAAGAGCATCCTAACAAATGTACTGGTGTGACAAGTGCTTCAACTTTGATGAAAAACCAAGAGAAGATAGGAGACTCAACTAAGAACTTCAAGAGGAAAGAGAGTGAAAAGGAAAGAAGGGACAACAATGAGAGTGAGAAAAAAAACACAAATACCGATGCCACTGATTGTGTGAATGTTGTTGGAGACAAGAAGGAGTGTCAGAAAATTGATGCTCATAAAGTCCAAAGGATACCATCCAAGCCTAAGGAGATGCCTTTACTTGAACTACTTGCTGAATGTTTTGGTAAGAAGCATAATTCTGTTAAAGATTATTCGAACAGGTTGGGAGTAAAGCATGATGATGTTCGCTGGCGAGATACTCAGCCACCACCTTTTGGACATGGAGGACTTCCATTGAAGTGCTTTTGGGACAAGGCGGAAGAGCCGGTGGAAAAATCAAAAGAAGAGGAGGAGTTGGATATGTTGTTCGAAGAACTTGATTTTCTGCACAGGTCAGAAGAAATTGATTCCAAGGTTGGAAATTCCAAGACAGATGAAGCAGAACCAAACAGAGGAAGTCCTTCCAGCTTGTGTAAGCATGACATAATTCTCGACGACGAGAATGGGATGATGTGCAGATTATGTCACTGGATCTTCGTGGACATAAAAAATATCGTCCCACCATTTGCGGATGAGAATGAATTTTCTAGATCAAGAAAGATTACATCACCTGATGGAGTGAATGGCCTACCCTTTGATGAGGCTGACTTTGATGTTTCTGCTGGTAACAAAGAGGCTATTTGGTCTCACAAAGAAGGCACTGTTTGGGACTTAATTCCCGACATGAAAAAGTGCTTTTATCCTCATCAACAAGAAGGTCTTGAGTTTATTTGGACAAATTTGGCAGGAACCATTGACCTTCAAAAGTTGAAGAATGCTGATCCTTGTAGTGCAGGTGGATGCATTATTTCTCATGCTCCTGGAACTGGAAAAACAAGGTTAACCATTGTTTTTCTTCATACATATTTGGAGTTATTTCCACAGTGCCGACCCATTATCATTGCTCCTGCTGGTTTATTGCTTACTTGGGAAGATGAGTTCAGAAAATGGAATATGGAAATTCCATTCCACAACCTGAACAATCTTGAATTATCAGGTAAAGAACAAGTTGATGCTACTAAAAAAGTTGATTTCAATAGAAATTCCAAACCAAATAAGAGTGACATACGTCTGTTGAAGCTATATTCGTGGTTCAAAGAGAATAGCATTTTAGGAATTAGCTACAATTTGTATGAGCAACTTGCAGGGGCAGAATCCAGAGCTGATGTAAAAACTGGGAGGCAAAAAATGAAAATCGAAAAAGAGAAGAAACATTCAAGTATGAAGAAGAAAGACACTGAAACTACAATAATGGGAAAGATTCTGCGCGAGAGTCCCGATTTGTTAGTACTTGATGAAGGCCACACACCTCGAAATCAGAGTAGTTGTATTTGGAGGGTCCTATCAGAAATTCAAACTCAGAAGCGAATTATCCTTTCAGGAACTCCTTTCCAGAATACATTTCTGGAACTCTATAACACATTGTGTTTAGCCAAACCAACTTTTCCTAACACAATACCACCAGAGCTCAAAAAATTCTGCCAAAGTAGATTAATACAAGAAAAGAAAGCACCCAAAGGATTGAGTTGGGAAGCGGCTTCTTCTTCTGCTTGCGCAACTAGAGATCCTGCTGATGAAAGAATAAACCAGTTGAAATTGCTGATGGATCCATTTGTTCATGTTTACAAAGGTAGCATTCTTCAAAAGAATCTACTTGGGCTGAGAGAATGTGTGGTGACTTTGAAGCCAGACAATTTCCAAAAAGCACTTCTACAGTGCATTGAATGTTCTCAAAACTCATTTGGGTTTGATCATAAATTGGCTTTGGTCTCTATCCATCCTTCTCTTTTCCTCCGCTGCCCACTTTCAGAAAAAGAAGAATCTGTTGTTGATAGGCGTCAATTGGAAGAGCTTGAATCGAATCCCTATGAAGGTGTCAAAACAAGATTTTTGGTGGAATTTGTCCGGCTGTGTGATGCATTGAATGAGAAAGTTCTCGTTTTCAGCGAATTCATTGATCCTTTATGTATGGTAATAAAGCAACTGGAGTCAATCTTTGATTGGTCTGAGGGGAAAGAAGTGCTGTATATGCATGGCAAGCTTAGTCAAAAGCAAAGGCAGACCCTGATTCATTCCTTCAATGATGCAAATAGCAAAGCAAAGCTATTGCTTGCATCCTCAAATGCATGTTCTGAGGGTATTAACTTAACTGGAGCTTCAAGGGTTGTGCTGCTGAATGTTCTTTGGAATCCCTCAAAGGAAAGACAAGCTATTAGCAGAGCATATAGAATTGGCCAAAAGAAAGTTGTGTATACTTATCATCTCATCACACAAGAGAGTTGGGCAAAATATTGTAAAAGCCAGAAAAAGGATTGGTATTCCGAAAAGATTTTCTCGGATAAAATTACTGGAAGTGGTGAGCAAGGGAGTTCTTCAGTGGCTTTAGAAGATAGAGTTCTTGATCAGATGGTTCACCATGACAAACTTAAGGACATGTTTGGTGACTGCTTCGTAGCCAGAGAGGAAAGAGATTTTGTTGAGACTTGA 3843 0.3903 MDSTNYVAKRTRSKKFSHIMKSFNGKFKPDFQFLGEESIFDKEVIGSVSSSMVRDREIGTSLKGEEKVGFLEDDDSVSLGGVKIVSFSEKRKNNRLKGKRVVESEPDFVFLGEDEDGCEFSSGIGSKQMRRMFEDNPEPADFIEIDDSDADDSVDVNGFEHCEKKRFDDAVDGNGGPENRVHIHLDEVRNSEEEEDDGVSESVSEFDTENDESSDEDFQVDDDREISSNEDDSTFDDDKKGSDRCRKRVRRNVSLHKETIDSATILESREHENKRGDNKDCEKTDASANECVDVDTQGGLPSKCFWEKAEEPVDKSELNMLWEEMDCELRSEEVDSPVGNARADEAEQSRVNPTNFSKHSKNLDKREEHPNKGARVVDNARTNEAEQSRGKQTNLCEHDMNLHKGKEHPNKCTGVTSASTLMKNQEKIGDSTKNFKRKESEKERRDNNESEKKNTNTDATDCVNVVGDKKECQKIDAHKVQRIPSKPKEMPLLELLAECFGKKHNSVKDYSNRLGVKHDDVRWRDTQPPPFGHGGLPLKCFWDKAEEPVEKSKEEEELDMLFEELDFLHRSEEIDSKVGNSKTDEAEPNRGSPSSLCKHDIILDDENGMMCRLCHWIFVDIKNIVPPFADENEFSRSRKITSPDGVNGLPFDEADFDVSAGNKEAIWSHKEGTVWDLIPDMKKCFYPHQQEGLEFIWTNLAGTIDLQKLKNADPCSAGGCIISHAPGTGKTRLTIVFLHTYLELFPQCRPIIIAPAGLLLTWEDEFRKWNMEIPFHNLNNLELSGKEQVDATKKVDFNRNSKPNKSDIRLLKLYSWFKENSILGISYNLYEQLAGAESRADVKTGRQKMKIEKEKKHSSMKKKDTETTIMGKILRESPDLLVLDEGHTPRNQSSCIWRVLSEIQTQKRIILSGTPFQNTFLELYNTLCLAKPTFPNTIPPELKKFCQSRLIQEKKAPKGLSWEAASSSACATRDPADERINQLKLLMDPFVHVYKGSILQKNLLGLRECVVTLKPDNFQKALLQCIECSQNSFGFDHKLALVSIHPSLFLRCPLSEKEESVVDRRQLEELESNPYEGVKTRFLVEFVRLCDALNEKVLVFSEFIDPLCMVIKQLESIFDWSEGKEVLYMHGKLSQKQRQTLIHSFNDANSKAKLLLASSNACSEGINLTGASRVVLLNVLWNPSKERQAISRAYRIGQKKVVYTYHLITQESWAKYCKSQKKDWYSEKIFSDKITGSGEQGSSSVALEDRVLDQMVHHDKLKDMFGDCFVAREERDFVET 1280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal2g1693 1280 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 1085 1242 IPR001650 -
Lal2g1693 1280 MobiDBLite consensus disorder prediction 418 456 - -
Lal2g1693 1280 MobiDBLite consensus disorder prediction 154 189 - -
Lal2g1693 1280 Pfam SNF2-related domain 696 1020 IPR000330 GO:0005524|GO:0140658
Lal2g1693 1280 CDD SF2_C_SNF 1054 1208 - -
Lal2g1693 1280 SMART ultradead3 681 945 IPR014001 -
Lal2g1693 1280 MobiDBLite consensus disorder prediction 573 594 - -
Lal2g1693 1280 MobiDBLite consensus disorder prediction 845 865 - -
Lal2g1693 1280 MobiDBLite consensus disorder prediction 359 375 - -
Lal2g1693 1280 MobiDBLite consensus disorder prediction 190 232 - -
Lal2g1693 1280 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 711 933 IPR014001 -
Lal2g1693 1280 Pfam Helicase conserved C-terminal domain 1091 1197 IPR001650 -
Lal2g1693 1280 Coils Coil 551 571 - -
Lal2g1693 1280 SMART helicmild6 1112 1197 IPR001650 -
Lal2g1693 1280 MobiDBLite consensus disorder prediction 257 285 - -
Lal2g1693 1280 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 878 1217 IPR027417 -
Lal2g1693 1280 MobiDBLite consensus disorder prediction 132 244 - -
Lal2g1693 1280 Gene3D - 658 969 IPR038718 -
Lal2g1693 1280 MobiDBLite consensus disorder prediction 331 396 - -
Lal2g1693 1280 Gene3D - 1006 1273 IPR027417 -
Lal2g1693 1280 MobiDBLite consensus disorder prediction 139 153 - -
Lal2g1693 1280 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 669 945 IPR027417 -
Lal2g1693 1280 PANTHER SNF2 DOMAIN-CONTAINING PROTEIN CLASSY 4 374 1279 - -
Lal2g1693 1280 PANTHER SNF2 DOMAIN-CONTAINING PROTEIN CLASSY 2-RELATED 374 1279 IPR044567 GO:0080188
Lal2g1693 1280 MobiDBLite consensus disorder prediction 429 456 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal2g1693 Lal-Chr2 19256457 19263557 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal2g1693 1095 1212 RAD5 or RAD16-like Gene Family AT5G43530 38.843 2.55e-15 79.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SNF2 Lal2g1693 SNF2_N 5.9e-17 CL0023
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal2g1693 K10875 - gmx:100806733 913.294