Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal2g1691 ATGATCACATTCTCATTCCTTGAAGATTTCTTTGATCTTAACTTTGATAACAAAGATCTCAAAGAAGATAGTTTTGATGATTCTCCTCCTAGCCTCAATGACCATTTAGTAAGTCCACTTTATGTCCCACAAGACCCATTACATGAGTTGGAATTATGGCACCCTAGTTTTTGGAATGAGTACTTATACTTTGATCCAAATCTAATAAGTGATTCCAACTCTTTTGTCAAAAATGATGAAAATTCTATAACCAAGACCAAACATGGTCACATGTTGTCTCAACCAATGGTTCAACATAAGCCATGTTTTACTAAGAAGATGCCTAGAAAAAGAAAACCAAGAAGAAAGAAGAAGACACTTTGTGGAACATGGGCAAGTTTTGGTTTTGTGAATTCAAAGCCAAATAAAGAGAAAAGGGCAAGTTTTGGTTTTGTGAATTCAAAGCCAAATAAAGAGAAAAGGGCAAGCTTTTATTTTGTGAATTCAAAGTCAAATAAAGAGAAAAGGGTAAGTTTTGGTTTTGTGAATTCAAAGCCAAATAAAGAGAAAGGGTCAAGTTTTGGTTTTGTGAATTCAAAGCCAAATAAAGAGAAAGGGTCAAGTTTTGGTTTTGTGAATTCAAACCCAAATAAAGAGAAAGGGTCAAGTTTTGGTTTTGTGAATTCAAAGCCAAATAATGAGAAAATGTGTAGCCATTGTGAGACAAAAAATAGTCCTTTATGGAGGGTTGGTCCAATGGGGAAAAATACATTATGCAATGCATGTGGAGTAAGATACAAATCTGGAAGATTGTTACCAGAATATAGACCACTTTCAAGTCCAACTTTTGATGCCAAAAAGCATTCAAATTATCATAGGAAGATATTGAAAATGAAAAATAGAGGACAACAATAG 894 0.3367 MITFSFLEDFFDLNFDNKDLKEDSFDDSPPSLNDHLVSPLYVPQDPLHELELWHPSFWNEYLYFDPNLISDSNSFVKNDENSITKTKHGHMLSQPMVQHKPCFTKKMPRKRKPRRKKKTLCGTWASFGFVNSKPNKEKRASFGFVNSKPNKEKRASFYFVNSKSNKEKRVSFGFVNSKPNKEKGSSFGFVNSKPNKEKGSSFGFVNSNPNKEKGSSFGFVNSKPNNEKMCSHCETKNSPLWRVGPMGKNTLCNACGVRYKSGRLLPEYRPLSSPTFDAKKHSNYHRKILKMKNRGQQ 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal2g1691 297 Pfam GATA zinc finger 230 264 IPR000679 GO:0006355|GO:0043565
Lal2g1691 297 PANTHER GATA TRANSCRIPTION FACTOR 93 294 - -
Lal2g1691 297 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 224 286 - -
Lal2g1691 297 PANTHER GATA TRANSCRIPTION FACTOR FAMILY PROTEIN-RELATED 93 294 - -
Lal2g1691 297 CDD ZnF_GATA 230 280 IPR000679 GO:0006355|GO:0043565
Lal2g1691 297 ProSiteProfiles GATA-type zinc finger domain profile. 224 260 IPR000679 GO:0006355|GO:0043565
Lal2g1691 297 Gene3D - 220 294 IPR013088 GO:0006355|GO:0008270
Lal2g1691 297 SMART GATA_3 224 278 IPR000679 GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal2g1691 Lal-Chr2 19247581 19248474 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal2g1691 227 294 C2C2-Gata Transcription Factor Family AT5G66320 63.235 3.37e-28 109
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Lal2g1691 GATA 4.8e-14 CL0167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal2g1691 - - cpap:110816123 128.642