Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal2g1679 ATGCCTCCAAGGAAAAAATCCAACGCTTCTTCTTCTTCTTCTTCCAAGAAACCTTCGAAATTCGGCATTCAACATTTCTTTGATCGCCACACCGCTTCTCAGCAGAAGATTCAGCAATCCAATGAGGCAAACCCCAACACTGCTTCCAATTCCAAATCCACCACTGATTTTACGGTTATACCCTCTCCGAACCTTCCAGAACCTTCTGCGTCGTCCAAATCAGGATATGTTGCTATCCGAACTGATAGTAGCAATAACAATGATGTTAATCGGACTTCTGAGATTACTCCGCCGGAGAATTTGGTGGTGCCGAGGAGTGATTGTGCGGTGATTGAGAGTCTCGCTGCCGAGGAGTCACCGGAGATGTCTAAGTCTGTGTCACTTAAACGCTTCAAATTCTCACCTGGGATGTTTATAAAGCAAAGTCAGGATGATGGGGCTGATGAGGTTACATGGAAGATATCTCCAGTCAATGAAAGACTCCAAGCAGTTTCCAAACAGATGCCTGCTATAATTAAAGCACTGTCTGACACTTCGAGAGTCAACTTGTTGCCATTTCGCAGCTGCTCAGAAAATAAGGCTTCTATTGATAAAGATGGAAAGGCTGACAAGTTGTTTACTTCACCTACTCCCAAGGCTTCTGCAAAAGCTGTGGTGTCAATGAGTAAATTAGGGTTGAAAAGGATAAACCTAGATTGTGACGTGGATTCTAATATCAGTGCAGGTGCTGTGAGTAACTCTGGAGCATCTAGTGGAGAGAGTCCCTTCAGAACTCCACCATCTTTGTCTTATTGCTCTGATAAGCTTGTCAAGGATATTGAGCACAGTGGACCACCTGGTCATTCTTATTTGAGACACAAAAAGGAATTTCTTGAGCTATTAGATCAAGTTGAAGATGCCATTGCTGTTGACGATGCTAATGTCTGTAATCAAAACATTTCCACTTTTAAATCTCAAGATGGAGTTGCTGATGAGCTTCCTGTCATAGCCAACCATAAAGTAGAAAAGACAAAATCACAAATACCTAAAGAGGTCGTTGGTGTGTTCTCCAATTATATTTTTTTGGTTTTGGAGGTGACTGAAAAATGTAGGATTTCTGATTCATCTGCTGCTGGATGCCAATACAAGGTGCTCCGTTTACTAAATGAACAAACTGGGGAAGAGCGGGCTGTAAACTTGTGGGATGAGTGGTCTTGCAGCGTAGTTGCGCCTGGAGACACTGTAAATGTAATCGGTCAATTTGAAGATGGAAATTGCAATATTGATCATGATAATAATTTTTTGATTGTACACCCAGATATTCTGATGTCTGGAACACGGGTTGCTTCCAGTTTCAGTTGTGCAAGGAGAACTGTCTTAGATGAGAGGCTAAAATCAAACGAGTACTCAATTGCAGCTCTAACTGGAACCTTGCTTCACCAAATTTTCCAGGCTGGGCTTATAAAAGTGTCTCCCACGGTAAACTTCTTGGAAGAATATGCAGAAGTGGTATTACAAAGAAACATTGAAAGTTTGTATGCATGCCAAGAAAACGAAGACAATGTTCGCAAAACCTTGATTAATTCTATCCCAAAATTATTAAGTTGGATCGGAGAGTTCAAGAATACAGAGGAACGAAAAAACCCCAATGTTAATTTCAGATTTAATGATTTCCCAAAGAAAGTTATCATATCTGAGGTAATTGATATTGAAGAGATGGCGTGGGCTCCTAAATATGGTTTGAAAGGGATGATTGATTCTTCTCTTAGAGTGAAAGTTCAATCAGCAAAAGATGAAGGAGAGAAGATCATGCCATTAGAGTTCAAAACCGGAAAATCATCAAATAGCCAGGCAAGATTCTGGTACCAGAAGACTATTGATTCTGGTCTTCTGTACTATCTCCAATCAGATCAGACACAGGGTATTGTTGCTGAAAGATCTGACTTAGTGGGATTAATAATGCAACGTAATGAGCTAGCCAGTGCTATTCTTAAGGCATTGACCTTGCAACATCTGCCACCAATGTTGCAGGCATGGACTTCTCCATATTCATACATTGTATTTTTAATATCTTTATCAGCTTGTCATCATAAGTCTTCATCTTCCGATTGTAGAGTCCTAGCCTTTGCAGAAGTTGTCGCCATCTTGATGTTTGCACATGGTGGAAGCACAAAGGGCAGTGGACTGGGAGATGTGTTTGATTCTCATACTAATCACCTGACATCTGCTCATTCTAAGTTCCTCTGCCATTGGGATCGACTGATTGACTTAGAAGCTAAAGGGACTGAGCTTTTAAAGAAACAAGTATGGCGATCACATGGCTTGAAGAATCCAATCAGTGGTGGCCTTTCCTCTATTGTTCTTGATTCTTCGCATGGAATTCCCCATGATAAATCTCCAAAAGACAATTGTTTCATCTATCGTTTTGTTCGACAAGATACTTCACGTGTCTCTGAAGTATCAGATGGTGATCCTTCTAGTGCTTCTCCAAATGATCTAGATCTCACGCTTCGAAGTGGAGACCACGTGATACTGAGCAATGGATCTAGCTGTCAACCTATTGCAAAGGGGGTGATCTCAGATATTAGTCAGACACATGTTTCCTTTTCTAAATGCTTAAGAATTCCTGGGAGGTCTTCCGCTACACACGATCTCCTTGAACAGGTTTGGAGACTTGATAAGGATGAATATGTCACATCATTTGCTATTATGAGGTTTAATCTTGTACAACTGTTTTTGCAAAATGATCGAAGCGATCATCTGCGGAGAATGATTGTTGACCTAGAGGCTCCTAGGTTTGACAGTGGATCTATAGTAAGCCAGGATCCCGCAATATCCTATGTTTGGTCAGAGAAGAGTTTGAATGATGATCAACGTAGAGCAGTTCTTAAGATACTTACAGCAAAAGATTATGCACTTATATTAGGGATGCCTGGAACGGGGAAGACATCCACAATGGTTCATGCTGTGAAATCCTTGTTGATTAGGGACACATCCATTTTGCTGACGGCCTATACAAACTCTGCTGTTGATAATTTACTCATCAAATTAAAAGCACAGGGAATTGATTTTGTACGTATTGGAAGAGATGAAGCAGTGCATGAGGACATCAGAGAACACTGCCTTTCAGCAACACAAGTAAAAAGTGTTGAAGATATCAAAATAAGGTTAGAACAGGTCAAAGTTGTTGCAGTTACTTGTCTGGGCATTTCCAGTCCTTTACTTGCTAACACAAGATTTGATGTATGTATTATGGATGAAGCTGGGCAGACCACTCTACCGGTATCCTTGGGCCCTCTAACTTTTGCGTCGGTGTTTGTACTTGTTGGGGATCATTATCAACTACCTCCACTTGTCCAGAGTACAGAGGCACGAGAGAATGGCATGGGGGTAAGTTTGTTTCGTAGACTCTCAGAGGCACATCCACAAGCAATTTCAGCATTACAGAGTCAGTACCGGATGTGTCAGAGCATTATGGACCTGTCAAATGCCTTGATATATGGTGACAGGTTGAGGTGTGGTTCGTCTGAGATAGCTAACAGAAAACTTGAATTTTCTGGCCTAAAATGTGGTTTTCCTTGGCTAGAAGATGTTTTAAGTCCAAGCAGGCCAGTGGTATTTATTGATACCGATATGTTGCCTGCTTTAGAGACGAGAGATCAGAAGATTATTAAAAATCCTCTTGAAGCTCACATAATTTCCGAGGTTTCAAAGGAATTGGTCAATAATGGGATTGCAGTAGAACAAATTGGTGTTATTACCCCCTATAATGCTCAGGCAAACCTCATTCGGCATGCTGCATGCACGACTTCCTTGGAGATACATACCATTGACAAATACCAGGGTAGAGATAAGGATTGCATTTTAATATCCTTCGTAAGGTCTAGTGAAGACCCAACAAGCAATGCTGCTTCTTTGCTTGGAGATTGGCACAGGATAAATGTGGCTCTCACTCGTGGAAAGAGAAAGTTGATCATGGTGGGGTCTTGTAGAACTCTATCAAAGGTTCCACTATTGAAGCTTCTCATTAAGAAGGTTGAGATGCAGTTTGGAATTTTAAGTGTCTCTAAGAAGGACATCTTTCAAACAGAATTGTTGTGCAATTTTGTTACTATCACCCATCAAATATCATGTTTTAATGGTGATATTGATTTAGAAATAAAAAGAACCACCCTTACTCCACTGGAAACTGTTTCCGGTAGTGTAAAAAAGATGGTGTTAAAAGAATCTACTATGAACTATTTAAGTGAA 4230 0.4076 MPPRKKSNASSSSSSKKPSKFGIQHFFDRHTASQQKIQQSNEANPNTASNSKSTTDFTVIPSPNLPEPSASSKSGYVAIRTDSSNNNDVNRTSEITPPENLVVPRSDCAVIESLAAEESPEMSKSVSLKRFKFSPGMFIKQSQDDGADEVTWKISPVNERLQAVSKQMPAIIKALSDTSRVNLLPFRSCSENKASIDKDGKADKLFTSPTPKASAKAVVSMSKLGLKRINLDCDVDSNISAGAVSNSGASSGESPFRTPPSLSYCSDKLVKDIEHSGPPGHSYLRHKKEFLELLDQVEDAIAVDDANVCNQNISTFKSQDGVADELPVIANHKVEKTKSQIPKEVVGVFSNYIFLVLEVTEKCRISDSSAAGCQYKVLRLLNEQTGEERAVNLWDEWSCSVVAPGDTVNVIGQFEDGNCNIDHDNNFLIVHPDILMSGTRVASSFSCARRTVLDERLKSNEYSIAALTGTLLHQIFQAGLIKVSPTVNFLEEYAEVVLQRNIESLYACQENEDNVRKTLINSIPKLLSWIGEFKNTEERKNPNVNFRFNDFPKKVIISEVIDIEEMAWAPKYGLKGMIDSSLRVKVQSAKDEGEKIMPLEFKTGKSSNSQARFWYQKTIDSGLLYYLQSDQTQGIVAERSDLVGLIMQRNELASAILKALTLQHLPPMLQAWTSPYSYIVFLISLSACHHKSSSSDCRVLAFAEVVAILMFAHGGSTKGSGLGDVFDSHTNHLTSAHSKFLCHWDRLIDLEAKGTELLKKQVWRSHGLKNPISGGLSSIVLDSSHGIPHDKSPKDNCFIYRFVRQDTSRVSEVSDGDPSSASPNDLDLTLRSGDHVILSNGSSCQPIAKGVISDISQTHVSFSKCLRIPGRSSATHDLLEQVWRLDKDEYVTSFAIMRFNLVQLFLQNDRSDHLRRMIVDLEAPRFDSGSIVSQDPAISYVWSEKSLNDDQRRAVLKILTAKDYALILGMPGTGKTSTMVHAVKSLLIRDTSILLTAYTNSAVDNLLIKLKAQGIDFVRIGRDEAVHEDIREHCLSATQVKSVEDIKIRLEQVKVVAVTCLGISSPLLANTRFDVCIMDEAGQTTLPVSLGPLTFASVFVLVGDHYQLPPLVQSTEARENGMGVSLFRRLSEAHPQAISALQSQYRMCQSIMDLSNALIYGDRLRCGSSEIANRKLEFSGLKCGFPWLEDVLSPSRPVVFIDTDMLPALETRDQKIIKNPLEAHIISEVSKELVNNGIAVEQIGVITPYNAQANLIRHAACTTSLEIHTIDKYQGRDKDCILISFVRSSEDPTSNAASLLGDWHRINVALTRGKRKLIMVGSCRTLSKVPLLKLLIKKVEMQFGILSVSKKDIFQTELLCNFVTITHQISCFNGDIDLEIKRTTLTPLETVSGSVKKMVLKESTMNYLSE 1410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal2g1679 1410 Gene3D - 1145 1351 IPR027417 -
Lal2g1679 1410 MobiDBLite consensus disorder prediction 1 20 - -
Lal2g1679 1410 CDD DEXXQc_DNA2 946 1146 - -
Lal2g1679 1410 MobiDBLite consensus disorder prediction 28 99 - -
Lal2g1679 1410 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 946 1331 IPR027417 -
Lal2g1679 1410 PANTHER DNA2/NAM7 HELICASE FAMILY 83 1357 IPR045055 -
Lal2g1679 1410 Pfam AAA domain 1123 1323 IPR041679 -
Lal2g1679 1410 CDD SF1_C_Upf1 1147 1340 IPR041679 -
Lal2g1679 1410 PANTHER DNA REPLICATION ATP-DEPENDENT HELICASE/NUCLEASE DNA2-LIKE 83 1357 - -
Lal2g1679 1410 MobiDBLite consensus disorder prediction 1 100 - -
Lal2g1679 1410 Pfam AAA domain 947 1040 IPR041677 GO:0004386
Lal2g1679 1410 Pfam AAA domain 1049 1114 IPR041677 GO:0004386
Lal2g1679 1410 Pfam DNA replication factor Dna2 383 583 IPR014808 -
Lal2g1679 1410 Gene3D - 881 1144 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal2g1679 Lal-Chr2 19127522 19151054 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal2g1679 1 1088 Core DNA Replication Machinery Family AT1G08840 49.822 0.0 976
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal2g1679 K10742 - gmx:100799415 1650.57