Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal2g1677 ATGAGTTGCTTTTCATACTTCAAGCACAAAACAAGAAATTTGAGGCAAAGATCAGCACCTGAACTTAATGATAAAGAGAAATCCTTATACACAGGGGTTGAAAGAGTTGATAGGTCATCCGGTTCGATCGATTCGCCACGTGGCGTACCCGAATTGTATGAGGAGAGGGCTCATAATTTAAGGGCATTTTCTTACATAGAGCTTAGACATGCAACTAATGATTTCAGTAGACTTTTTAAGATAGGGGAAGGTGGTTTTGGAAGTGTATATAAAGGTACAATCAAACCTATTGGTGGGAAAGGGGACCCTATTCTAGTTGCAATCAAAAGGCTTAACCAGGATGGATTACAGGGTCATAGGCAGTGGTTGGCAGAAGTTCAGTTTCTTGGTGTTGTTGAGCACCCAAATCTTGTGAAACTCATTGGATATTGTGCTGTGGATGGTGAAAAAGGGATTCAGAGACTACTTGTATATGAATTCATGTCAAATAGAAGTTTAGAATCTCACCTTTTCAATAAAGCTTATGACCCTCTTCCTTGGAAAAGAAGACTTGAGATAGCTCTTGGAGCAGCTCAAGGGTTAGCTTATCTGCATGAAGAGTCTGAAGTTCAGGTGATATATCGAGATTTTAAATGCTCGAATGTATTATTGGATGAAAATTTTAAGCCAAAACTTTCGGATTTTGGACTAGCGCGGGAGGGGCCAATAGCAGGGCATACACATGTTTCTACTGCTGTGATGGGGACATTTGGTTATGCTGCTCCAGATTATATTCAGACTGGCCATCTCACCACCAAGAGTGATGTGTGGAGTTTTGGCGTCTTTCTATACGAAATACTTACTGGAAGGCGTGCAATGGAGAGCAACCGACCGAAACCAGAAGAAGAACTTTTGGAATGGGTGAAACAGCACCCTCCTGAAAGCAAAGGGTTTGTCTTGTTGATGGATCCAAGGCTAATAGGCCAGTATTCCATTTACGGAGCGCAAGAACTTGCGAAGCTCGCAGATGATTGTCTGCATAAGAGTGCAAAAGATCGACCAACAACGAGTCAGGTGGTAGAGAGATTGAAGCAGATAATCCAAGTTTCCGAGGATGAATCATCTGTAGAGAAAAGAATTATTGACATATCTGATGATGACACTGTTGAGCCCGAAGAAAAACCGAACGAATCAACCCCTTTAGAGTCATGGAAAAGGAGGATGGCCCATCTAGCAAAACTTGGCGAGCGCGTGGAGAGTGATAGTAGAAGAAAACTCTTGTTCCTACAGAGTGCTAAAGTTCCATGA 1287 0.4219 MSCFSYFKHKTRNLRQRSAPELNDKEKSLYTGVERVDRSSGSIDSPRGVPELYEERAHNLRAFSYIELRHATNDFSRLFKIGEGGFGSVYKGTIKPIGGKGDPILVAIKRLNQDGLQGHRQWLAEVQFLGVVEHPNLVKLIGYCAVDGEKGIQRLLVYEFMSNRSLESHLFNKAYDPLPWKRRLEIALGAAQGLAYLHEESEVQVIYRDFKCSNVLLDENFKPKLSDFGLAREGPIAGHTHVSTAVMGTFGYAAPDYIQTGHLTTKSDVWSFGVFLYEILTGRRAMESNRPKPEEELLEWVKQHPPESKGFVLLMDPRLIGQYSIYGAQELAKLADDCLHKSAKDRPTTSQVVERLKQIIQVSEDESSVEKRIIDISDDDTVEPEEKPNESTPLESWKRRMAHLAKLGERVESDSRRKLLFLQSAKVP 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal2g1677 428 Gene3D Phosphorylase Kinase; domain 1 55 160 - -
Lal2g1677 428 ProSiteProfiles Protein kinase domain profile. 75 360 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal2g1677 428 MobiDBLite consensus disorder prediction 378 397 - -
Lal2g1677 428 CDD STKc_IRAK 81 359 - -
Lal2g1677 428 Gene3D Transferase(Phosphotransferase) domain 1 161 382 - -
Lal2g1677 428 PANTHER OS01G0588500 PROTEIN-RELATED 35 413 - -
Lal2g1677 428 ProSitePatterns Serine/Threonine protein kinases active-site signature. 205 217 IPR008271 GO:0004672|GO:0006468
Lal2g1677 428 ProSitePatterns Protein kinases ATP-binding region signature. 81 109 IPR017441 GO:0005524
Lal2g1677 428 Pfam Protein tyrosine and serine/threonine kinase 80 356 IPR001245 GO:0004672|GO:0006468
Lal2g1677 428 SUPERFAMILY Protein kinase-like (PK-like) 58 365 IPR011009 -
Lal2g1677 428 PANTHER OS07G0495150 PROTEIN 35 413 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal2g1677 Lal-Chr2 19112013 19116170 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal2g1677 1 356 Glycoside Hydrolase AT3G07070 44.022 2.16e-91 280
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Lal2g1677 PK_Tyr_Ser-Thr 3.1e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal2g1677 - - cam:101511022 631.328
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal2g1677 2 19112013 19116170 Lal2g1677 2 19112013 19116170 ECH