Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lal2g1677 | ATGAGTTGCTTTTCATACTTCAAGCACAAAACAAGAAATTTGAGGCAAAGATCAGCACCTGAACTTAATGATAAAGAGAAATCCTTATACACAGGGGTTGAAAGAGTTGATAGGTCATCCGGTTCGATCGATTCGCCACGTGGCGTACCCGAATTGTATGAGGAGAGGGCTCATAATTTAAGGGCATTTTCTTACATAGAGCTTAGACATGCAACTAATGATTTCAGTAGACTTTTTAAGATAGGGGAAGGTGGTTTTGGAAGTGTATATAAAGGTACAATCAAACCTATTGGTGGGAAAGGGGACCCTATTCTAGTTGCAATCAAAAGGCTTAACCAGGATGGATTACAGGGTCATAGGCAGTGGTTGGCAGAAGTTCAGTTTCTTGGTGTTGTTGAGCACCCAAATCTTGTGAAACTCATTGGATATTGTGCTGTGGATGGTGAAAAAGGGATTCAGAGACTACTTGTATATGAATTCATGTCAAATAGAAGTTTAGAATCTCACCTTTTCAATAAAGCTTATGACCCTCTTCCTTGGAAAAGAAGACTTGAGATAGCTCTTGGAGCAGCTCAAGGGTTAGCTTATCTGCATGAAGAGTCTGAAGTTCAGGTGATATATCGAGATTTTAAATGCTCGAATGTATTATTGGATGAAAATTTTAAGCCAAAACTTTCGGATTTTGGACTAGCGCGGGAGGGGCCAATAGCAGGGCATACACATGTTTCTACTGCTGTGATGGGGACATTTGGTTATGCTGCTCCAGATTATATTCAGACTGGCCATCTCACCACCAAGAGTGATGTGTGGAGTTTTGGCGTCTTTCTATACGAAATACTTACTGGAAGGCGTGCAATGGAGAGCAACCGACCGAAACCAGAAGAAGAACTTTTGGAATGGGTGAAACAGCACCCTCCTGAAAGCAAAGGGTTTGTCTTGTTGATGGATCCAAGGCTAATAGGCCAGTATTCCATTTACGGAGCGCAAGAACTTGCGAAGCTCGCAGATGATTGTCTGCATAAGAGTGCAAAAGATCGACCAACAACGAGTCAGGTGGTAGAGAGATTGAAGCAGATAATCCAAGTTTCCGAGGATGAATCATCTGTAGAGAAAAGAATTATTGACATATCTGATGATGACACTGTTGAGCCCGAAGAAAAACCGAACGAATCAACCCCTTTAGAGTCATGGAAAAGGAGGATGGCCCATCTAGCAAAACTTGGCGAGCGCGTGGAGAGTGATAGTAGAAGAAAACTCTTGTTCCTACAGAGTGCTAAAGTTCCATGA | 1287 | 0.4219 | MSCFSYFKHKTRNLRQRSAPELNDKEKSLYTGVERVDRSSGSIDSPRGVPELYEERAHNLRAFSYIELRHATNDFSRLFKIGEGGFGSVYKGTIKPIGGKGDPILVAIKRLNQDGLQGHRQWLAEVQFLGVVEHPNLVKLIGYCAVDGEKGIQRLLVYEFMSNRSLESHLFNKAYDPLPWKRRLEIALGAAQGLAYLHEESEVQVIYRDFKCSNVLLDENFKPKLSDFGLAREGPIAGHTHVSTAVMGTFGYAAPDYIQTGHLTTKSDVWSFGVFLYEILTGRRAMESNRPKPEEELLEWVKQHPPESKGFVLLMDPRLIGQYSIYGAQELAKLADDCLHKSAKDRPTTSQVVERLKQIIQVSEDESSVEKRIIDISDDDTVEPEEKPNESTPLESWKRRMAHLAKLGERVESDSRRKLLFLQSAKVP | 428 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lal2g1677 | 428 | Gene3D | Phosphorylase Kinase; domain 1 | 55 | 160 | - | - | |
Lal2g1677 | 428 | ProSiteProfiles | Protein kinase domain profile. | 75 | 360 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Lal2g1677 | 428 | MobiDBLite | consensus disorder prediction | 378 | 397 | - | - | |
Lal2g1677 | 428 | CDD | STKc_IRAK | 81 | 359 | - | - | |
Lal2g1677 | 428 | Gene3D | Transferase(Phosphotransferase) domain 1 | 161 | 382 | - | - | |
Lal2g1677 | 428 | PANTHER | OS01G0588500 PROTEIN-RELATED | 35 | 413 | - | - | |
Lal2g1677 | 428 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 205 | 217 | IPR008271 | GO:0004672|GO:0006468 | |
Lal2g1677 | 428 | ProSitePatterns | Protein kinases ATP-binding region signature. | 81 | 109 | IPR017441 | GO:0005524 | |
Lal2g1677 | 428 | Pfam | Protein tyrosine and serine/threonine kinase | 80 | 356 | IPR001245 | GO:0004672|GO:0006468 | |
Lal2g1677 | 428 | SUPERFAMILY | Protein kinase-like (PK-like) | 58 | 365 | IPR011009 | - | |
Lal2g1677 | 428 | PANTHER | OS07G0495150 PROTEIN | 35 | 413 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lal2g1677 | Lal-Chr2 | 19112013 | 19116170 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lal2g1677 | 1 | 356 | Glycoside Hydrolase | AT3G07070 | 44.022 | 2.16e-91 | 280 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_RLCK-VIIa-2 | Lal2g1677 | PK_Tyr_Ser-Thr | 3.1e-45 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lal2g1677 | - | - | cam:101511022 | 631.328 |