Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal2g1637 ATGAGTCGTAGAGTGAGGAGGAAAGTGGCTAGGGAAAGCAAAGCGATTGTGGTGTCTGGGAGTTGCCCTGAAATTCAAGACGAAATCTTCGATTTAGAATGCCAAGGGATTGTTGATTGGAGGAGCTTACCTGATGATACAGTGATTCAGTTGTTGTCATGTTTAAGTTATCGAGACCGAGCAAGTTTATCGTCAACTTGTAGGACATGGAGGTTTCTTGGCAATTCACCATGTTTATGGACTTCACTGGATATTCGGTCCAACAAGTTTGATGCCAACATGGCATCTTCACTTACTCCTAGGTGTGTGCATCTTCAGAAGCTTAGATTTCGTGGGGCGGAGTCTGCCGATGCAATAATTCATCTCCAAGCTAGGAACTTGCGTGAATTAAGCGGAGACTATTGCAGGAAGATTACTGATGCGACTCTTGCAGTAATCGCGGCTCGACATGAGTTACTTGAGAGCCTTCAGCTTGGACCAGATTTCTGTGAAAGAATAAGTAGTGATGCTATTAAAGCAGTAGCCCATTGCTGTCCTAGATTGAGCAAACTAAGGCTCTCGGGTATTATGGACGTAAATGCTGATGCTATTAATGCCTTGGGTAAGTTTTGTCCAAAATTGACTGATATTGGGTTCATCGACTGCCTGAATGTCGATGAGGTTGCATTAGGAAATGTGTCATCACTTCGTTTCCTTTCTGTTGCGGGGACATCGGGCATGAAGTGGGGTGTGGTTTCCAATCTTTGGCATGAGCTTCCTAACCTGATCGGATTAGATGTTTCAAGAACTGATATTGGTCCATCTACTGTTGCAAGGTTGTTAGCCTCATCGCAGAACTTGCGGATTATGTGTGGTTTGAATTGTCCTATCCTTGAAGAAGATACTAGCTTTTCTGCAAGTAAATATAAGAACAAGTTATTAATTTCCCTTTCTACTGATATTTTTAAAGGTCTAGGTTCTTTATTTTTTGATGATACAAACAAAGGGAAGAATGTGTTTTTGGACTGGAGGAATTCAAAGAGTAATAATAAGGAGCTTAATGAAATTATACCCTGGCTTGAGTGGATGCTATCGCATACACTTTTGCGATCTGCTGAGAGCCCTCAACAGGGTCTGGATAAGTTCTGGATTGAACAAGGTGCATCACTCTTGCTTAGCCTAACGCATAGTTCTCAAGAGGATGTTCAAGAGAGGGCAGCCACGGGTCTCGCAACTTTTGTTGTAATTGATGATGAAAATGCCAGGATTGATTGTGGAAGGGCTGAAGCAGTTATGCGTGATGGTGGCATACGCCTCCTTCTTGGCTTAGCAAACTCTTGGAGGGAAGGACTTCAGTCTGAGGCAGCTAAGGCCATTGCAAATTTGTCCGTCAATGCCAATGTGGCCAAAGCTGTTGCACAAGAGGGTGGAATCAATATTCTTGCTGGTTTAGCTAGGTCAACGAACAAGCTGGTGGCTGAAGAGGCTGCTGGGGGATTGTGGAACCTCTCTGTTGGAGAGGAGCACAAGGGTGCAATTGCTGAAGCTGGTGGAATACAAGCTTTAGTGGATCTTATATTCAAGTGGTCCTCTAGTGGAGAAGGAGTTTTGGAACGTGCCGCTGGTGCATTAGCTAATTTGGCAGCTGATGATAAGTGTAGTACAGAAGTTGCAGTGGCAGGAGGCGTACATGCTCTAGTGATGCTTGCTCGTCACTGCAAATTCGAGGGAGTGCAAGAGCAGGCTGCTCGTGCATTGGCAAACTTAGCTGCTCATGGAGATAGCAACACTAATAATGCTGCTGTTGGGCAAGAATCGGGTGCACTTGAGGCACTTGTTCAATTGACACGATCTCCTAATGAGGGTGTCAGGCAAGAAGCTGCTGGTGCACTTTGGAATTTGTCATTTGACGATAGAAATCGAGAAGCCATTGCAGCAGGTGGTGGAGTTCAAGCCTTGGTTGCTCTTGCCCAATCATGTTCTAATGCCTCACCTGGACTTCAGGAGAGGGCTGCTGGCGCACTTTGGGGATTGTCAGTTTCTGAAGCCAATAGGATGATCTTTTTAGAGGCATCGAAATTTATAGCTGTAGGGCACAGTTATGAAGAAATGCTACTGCGTAACACTCTGAGAGTGATTTTTATTCGCATCGCCATTGGACGAGAAGGAGGTGTTGCACCTCTGATTTCACTGGCAAGGTCTGAAGCAGAGGCCACTTTCCACTTTCAGGATGTTCATGAAACCGCTGCTGGAGCACTATGGAATCTTGCTTTCAACCCGGGTAATGCTCTACGAATAGTGGAAGAAGGAGGAGTTTCTGCACTTGTCGATCTTTGCTCTTCATCAGTATCTAAAATGGCCCGGTTCATGGCTGCATTGGCATTGACTTACATGTTTGATGGGAGAATGGATGAGTTTGCTTTAGTAGGAACTTCAACAGAAAGTACTTCTAAGAGTGTGAGCTTGGATGGAGCTAGAAGGATGGCTTTGAAAAATATTGAAGCTTTTGTCCTCATTTTTTCTGATCCACAAGCATTTGCGGCAGCGGCTGCATCGTCAGCTCCTGCGGCATTAGCACAAGTTACTGAGAGTGCTCGTATTCAAGAAGCAGGACATCTGAGATGCAGTTACTATGATTGCAATCACGATTGCGGTCGTTGCGATGCAGATTGCGGCCGTTGCAGAGTGAATTCTTGTGATTCAAAAAATATTTGTGGTTCTGAAATTGGAAGATTTGTTACTATGCTACGAAATCCATCATCGATACTCAAAGCTTGCGCGGGTTTCGCTCTTCTCCAGTTTACAATTCCCGGTGGACGACATGCAAAGCACCATGCTAGCCTGATGCAGAATGCAGGAGCAGCAAGAGTCCTTCGTGGTGCGGCTGCAGCAGCATCGGCTCCACTTGAAGCAAAAATTTTCGCCAGAATTGTTCTTCGCAATCTCGAGTATCACCAGATAGAGCACACAATCTAG 2955 0.4518 MSRRVRRKVARESKAIVVSGSCPEIQDEIFDLECQGIVDWRSLPDDTVIQLLSCLSYRDRASLSSTCRTWRFLGNSPCLWTSLDIRSNKFDANMASSLTPRCVHLQKLRFRGAESADAIIHLQARNLRELSGDYCRKITDATLAVIAARHELLESLQLGPDFCERISSDAIKAVAHCCPRLSKLRLSGIMDVNADAINALGKFCPKLTDIGFIDCLNVDEVALGNVSSLRFLSVAGTSGMKWGVVSNLWHELPNLIGLDVSRTDIGPSTVARLLASSQNLRIMCGLNCPILEEDTSFSASKYKNKLLISLSTDIFKGLGSLFFDDTNKGKNVFLDWRNSKSNNKELNEIIPWLEWMLSHTLLRSAESPQQGLDKFWIEQGASLLLSLTHSSQEDVQERAATGLATFVVIDDENARIDCGRAEAVMRDGGIRLLLGLANSWREGLQSEAAKAIANLSVNANVAKAVAQEGGINILAGLARSTNKLVAEEAAGGLWNLSVGEEHKGAIAEAGGIQALVDLIFKWSSSGEGVLERAAGALANLAADDKCSTEVAVAGGVHALVMLARHCKFEGVQEQAARALANLAAHGDSNTNNAAVGQESGALEALVQLTRSPNEGVRQEAAGALWNLSFDDRNREAIAAGGGVQALVALAQSCSNASPGLQERAAGALWGLSVSEANRMIFLEASKFIAVGHSYEEMLLRNTLRVIFIRIAIGREGGVAPLISLARSEAEATFHFQDVHETAAGALWNLAFNPGNALRIVEEGGVSALVDLCSSSVSKMARFMAALALTYMFDGRMDEFALVGTSTESTSKSVSLDGARRMALKNIEAFVLIFSDPQAFAAAAASSAPAALAQVTESARIQEAGHLRCSYYDCNHDCGRCDADCGRCRVNSCDSKNICGSEIGRFVTMLRNPSSILKACAGFALLQFTIPGGRHAKHHASLMQNAGAARVLRGAAAAASAPLEAKIFARIVLRNLEYHQIEHTI 984
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal2g1637 984 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 600 642 IPR000225 GO:0005515
Lal2g1637 984 ProSiteProfiles F-box domain profile. 37 83 IPR001810 GO:0005515
Lal2g1637 984 SMART fbox_2 43 83 IPR001810 GO:0005515
Lal2g1637 984 Pfam F-box-like 40 86 IPR001810 GO:0005515
Lal2g1637 984 Gene3D Ribonuclease Inhibitor 33 306 IPR032675 -
Lal2g1637 984 Pfam Armadillo/beta-catenin-like repeat 597 628 IPR000225 GO:0005515
Lal2g1637 984 Pfam Armadillo/beta-catenin-like repeat 545 584 IPR000225 GO:0005515
Lal2g1637 984 Pfam Armadillo/beta-catenin-like repeat 630 672 IPR000225 GO:0005515
Lal2g1637 984 Pfam Armadillo/beta-catenin-like repeat 500 542 IPR000225 GO:0005515
Lal2g1637 984 Pfam Armadillo/beta-catenin-like repeat 463 497 IPR000225 GO:0005515
Lal2g1637 984 SUPERFAMILY ARM repeat 371 681 IPR016024 -
Lal2g1637 984 SMART arm_5 417 457 IPR000225 GO:0005515
Lal2g1637 984 SMART arm_5 589 629 IPR000225 GO:0005515
Lal2g1637 984 SMART arm_5 543 584 IPR000225 GO:0005515
Lal2g1637 984 SMART arm_5 499 542 IPR000225 GO:0005515
Lal2g1637 984 SMART arm_5 704 751 IPR000225 GO:0005515
Lal2g1637 984 SMART arm_5 752 793 IPR000225 GO:0005515
Lal2g1637 984 SMART arm_5 630 673 IPR000225 GO:0005515
Lal2g1637 984 SMART arm_5 458 498 IPR000225 GO:0005515
Lal2g1637 984 Gene3D - 481 568 IPR011989 -
Lal2g1637 984 PANTHER PROTEIN ARABIDILLO 1 1 970 IPR044583 -
Lal2g1637 984 SUPERFAMILY RNI-like 49 293 - -
Lal2g1637 984 Gene3D - 355 480 IPR011989 -
Lal2g1637 984 Gene3D - 569 690 IPR011989 -
Lal2g1637 984 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 510 555 IPR000225 GO:0005515
Lal2g1637 984 SUPERFAMILY ARM repeat 704 792 IPR016024 -
Lal2g1637 984 SMART LRR_CC_2 124 149 IPR006553 -
Lal2g1637 984 SMART LRR_CC_2 204 229 IPR006553 -
Lal2g1637 984 SMART LRR_CC_2 178 203 IPR006553 -
Lal2g1637 984 Gene3D - 691 813 IPR011989 -
Lal2g1637 984 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 641 686 IPR000225 GO:0005515
Lal2g1637 984 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 428 470 IPR000225 GO:0005515
Lal2g1637 984 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 716 764 IPR000225 GO:0005515
Lal2g1637 984 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 469 511 IPR000225 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal2g1637 Lal-Chr2 18586326 18597462 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal2g1637 522 795 U-box Gene Family AT2G23140 28.364 1.64e-13 72.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal2g1637 - - gmx:100819086 1505.73