Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal2g1621 ATGGAAAATGATGCTAATTTCACCATCTCAAACAACTCTATCATCACTAAAACCACCACCATATCTTCCTCCTCCACTTTTTCTTCATCAACAACATCTTCTACCTCAAACTCATGCACCAAACAAGACTCCAAAAAGGGTCCTCCAAATGATTCAACAAAACCTAAAAACACAAAAAATGGAACCAAGGAGTACTGCAAGAAGAGACAAAGGAATGAGAATGAAGCAAAGAACCCTACTTATAGAGGTGTAAGAATGAGAAACTGGGGCAAATGGGTATCTGAAATCCGTGAACCTAAAAAGAAAACAAGAATATGGCTAGGAACATACCCTACAGCAGAAATGGCAGCTAGGGCACATGATGTTGCTGCTTTAGCTATCAAAGGCAATTCAGCTTTTCTCAATTTCCCTAAATTGGCACAAGAGCTTCCAAAACCTGAAACCTCATCTCCTAAGGATATTCAAGCTGCTGCAGCAAAAGCAGCTACTACTATCTTTGAAGAAGCTACTAAGGATTATTGTGAAGCTGATAATGATGCTGAAAATAACCAAAACCAATTAGTAGAACATGCTACTTCATCTTCAACTATTTTCAATGATAATTCTTTAGAGTCTTCAACTTCTCCCTCTACTATAGATGATGACACATTGTTTGACCTACCAGATCTTTTCTCTGATGGAAATAATGCACCTTTCTCATATTCTTCTACTTCTTGGAATTTATGTACTCTTGAGAGTGGATTCATACTAGAGGAGCAATTTTTGTGGGAGAACTATTAG 780 0.3756 MENDANFTISNNSIITKTTTISSSSTFSSSTTSSTSNSCTKQDSKKGPPNDSTKPKNTKNGTKEYCKKRQRNENEAKNPTYRGVRMRNWGKWVSEIREPKKKTRIWLGTYPTAEMAARAHDVAALAIKGNSAFLNFPKLAQELPKPETSSPKDIQAAAAKAATTIFEEATKDYCEADNDAENNQNQLVEHATSSSTIFNDNSLESSTSPSTIDDDTLFDLPDLFSDGNNAPFSYSSTSWNLCTLESGFILEEQFLWENY 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal2g1621 259 ProSiteProfiles AP2/ERF domain profile. 80 137 IPR001471 GO:0003700|GO:0006355
Lal2g1621 259 PRINTS Ethylene responsive element binding protein signature 81 92 IPR001471 GO:0003700|GO:0006355
Lal2g1621 259 PRINTS Ethylene responsive element binding protein signature 103 119 IPR001471 GO:0003700|GO:0006355
Lal2g1621 259 MobiDBLite consensus disorder prediction 1 46 - -
Lal2g1621 259 CDD AP2 81 137 IPR001471 GO:0003700|GO:0006355
Lal2g1621 259 Gene3D AP2/ERF domain 80 138 IPR036955 GO:0003700|GO:0006355
Lal2g1621 259 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 15 259 - -
Lal2g1621 259 PANTHER ETHYLENE RESPONSE FACTOR 15 259 - -
Lal2g1621 259 SUPERFAMILY DNA-binding domain 80 137 IPR016177 GO:0003677
Lal2g1621 259 MobiDBLite consensus disorder prediction 47 80 - -
Lal2g1621 259 Pfam AP2 domain 79 129 IPR001471 GO:0003700|GO:0006355
Lal2g1621 259 MobiDBLite consensus disorder prediction 1 82 - -
Lal2g1621 259 SMART rav1_2 80 143 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal2g1621 Lal-Chr2 18308031 18308810 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal2g1621 68 255 AP2-EREBP Transcription Factor Family AT2G44940 50.000 8.84e-64 199
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Lal2g1621 AP2 6.3e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal2g1621 - - pvu:PHAVU_008G141000g 276.174
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal2g1621 2 18308031 18308810 Lal2g1621 2 18308031 18308810 ECH
Lal2g1621 2 18308031 18308810 Lal9g1463 9 16931229 16931972 LSH
Lal2g1621 2 18308031 18308810 Lal1g2072 1 22938565 22939296 LSH