Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal2g1620 ATGGTGGATGGAAGAACAGCATGCTGTGATAAGAATCAGGTTAAGAAAGGCCCTTGGAGTTCTGTAGAAGAAATGAAGTTGATAAGTTTCATTCAAAAATATGGCCATGATAATTGGCGTGCTCTCCCCAAAAAAAGCAGCAAGGTTAAGATGTTCCGAAGGCATTTGCTTTGGAAGATTGTTGTTTCTGTATAA 195 0.3897 MVDGRTACCDKNQVKKGPWSSVEEMKLISFIQKYGHDNWRALPKKSSKVKMFRRHLLWKIVVSV 64
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal2g1620 64 PANTHER TRANSCRIPTION FACTOR MYB72 1 46 - -
Lal2g1620 64 SUPERFAMILY Homeodomain-like 14 46 IPR009057 -
Lal2g1620 64 CDD SANT 18 48 IPR001005 -
Lal2g1620 64 ProSiteProfiles Myb-like domain profile. 11 45 IPR001005 -
Lal2g1620 64 Gene3D - 6 55 - -
Lal2g1620 64 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 46 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal2g1620 Lal-Chr2 18268176 18269533 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal2g1620 1 64 MYB Transcription Factor Family AT1G79180 49.315 8.26e-19 75.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Lal2g1620 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal2g1620 K09422 - fve:101307762 80.1073