Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal2g1605 ATGTCTCGCTTCTCCAGGTCCTCCGCACCGCGCCTCCTCTATTACACCATCCGCTCCTCCACCACCACCACCACCGCCACTCCTTCCTTCTCCCTCCTTGCCGCCACCTTCCACCTCCGTCACTTCTCTGCCGGCGGCAACTTTGCGCGCAAGAGCGATTCGAATGAGCCATGGTGGAAGGAGTCCGCGCAGCGCATGCGGAATATCGGGATCTCGGCGCATATTGACTCCGGCAAGACGACTCTGACGGAGCGGGTTTTGTACTATACTGGTCGGATTCATGAGATTCATGAAGTGAGAGGAAGAGACGGTGTCGGCGCGAAGATGGATTCCATGGATTTGGAGAGGGAGAAAGGGATTACTATTCAGTCTGCTGCTACTTTCTGCACTTGGAAAGATTATAAGATTAACATAATCGATACACCTGGTCACGTTGATTTCACCATTGAGGTTGAGAGGGCTTTGCGTGTCCTTGATGGTGCCGTTCTTGTTCTTTGTAGTGTTGGTGGGGTGCAAAGTCAGTCCATTACTGTTGATCGGCAAATGAAAAGATACGAAGTTCCAAGACTTGCATTTATCAACAAGCTTGATCGGATGGGAGCAGATCCATGGAAAGTTTTAAATCAGGCAAGATCTAAGCTTCGGCATCATAGTGCTGCAATGCAAGTTCCAATAGGCTTGGAAGATGATTTTAAGGGACTTATTGATCTTGTGCATTTAAAGGCCTACTATTTTCATGGTTCTATGGGTGAAAATATTGTTGCTGAAGAAGTTCCTGCGGACATGGAAGCTTTAGTGTCAGAAAAAAGACGTGAACTTATAGAAACTGTGTCAGAGATTGACGATAAACTTGCTGAAGCTTTTCTTAATGATGAGCCCATATCAGCTGCTGATCTTGAGGAAGCAGTAAGAAGAGCCACCATATCACGGAAATTCATACCAGTTTTTATGGGTAGTGCTTTCAAAAATAAGGGGGTGCAGCCACTTCTGGATGGTGTACTTAGTTATTTGCCATGTCCAATTGAAGTTAATAATTATGCCCTTGACCAAACTAAGAATGAGGAGAAGGTTGAGTTGCCTGGAAGTCCAGATGGTCCACTTGTGGCATTGGCTTTCAAGTTGGAGGAAGGTCGGTTCGGTCAGTTAACATATCTAAGAATCTATGAGGGTGTCATTCGGAAGGGTGATTTTATTATTAACGTTAACACCGGCAAGAAGATCAAGTATAATGAACTTGTGGCTGAAACCTTTCTTCTCTTAATTCAGGTTCCTCGTTTGGTTCGGATGCATTCTGATGAGATGGAGGACATTCAAGATGCTCATGCTGGGCAAATAGTTGCTGTATTTGGTGTAGATTGTGCATCAGGAGATACTTTTACTGATGGGTCAGTTAAATACACAATGACTTCTATGAATGTTCCTGAGCCAGTGATGTCATTAGCTGTACAGCCAGTCTCAAAGGATTCTGGAGGACAATTTTCAAAAGCTTTGAATCGCTTCCAAAAAGAGGACCCTACTTTCCGAGTTGGTTTGGACCCTGAGAGCGGGCAGACGATCATTTCTGGAATGGGGGAACTGCATTTAGATATCTATGTTGAACGCATTAAGAGAGAATACAAGGTTGATGCTTCAGTTGGAAAGCCCCGTGTAAACTTCAGAGAAACTGTTACTCAGCGTGCTGATTTTGATTATTTACATAAGAAGCAAAGTGGAGGGCAAGGTCAATATGGTCGGGTAATTGGGTATATTGAACCACTTCCTGCAGGATCACCAACTAAGTTTGAATTTGAAAACCTTCTTGTTGGGCAAGCTATTCCATCAAATTTTATCCCAGCAATTGAGAAAGGTTTCAAGGAAGCTGCCAACTCCGGTTCCTTAATTGGCCATCCAGTTGAAAATCTCCGAGTTGTCTTGATAGATGGTGCTGCCCACGCTGTTGATTCCAGTGAACTTGCATTTAAGATGGCTTCTATCTATGCTTTTAGACAGTGCTACACAGCTTCCAGACCAGTTATTTTAGAACCTGTTATGCTTGTTGAGCTAAAAGTACCAACAGAATTTCAAGGAGCTGTTGCTGGTGACATCAACAAGAGAAAAGGCATTATTGTTGGAAATGACCAGGAAGGAGATGATTCTGTCATTACTGCCCACGTCCCTCTTAACAATATGTTTGGGTACTCTACAGCTCTTCGTTCAATGACACAGGGAAAAGGTGAATTCACAATGGAATACAAGGAACATTCACCAGTTTCTAATGATGTACAGATACAATTGGTAAACACTTACAAGGGGAATAAAGCTGCTGAATAA 2310 0.4377 MSRFSRSSAPRLLYYTIRSSTTTTTATPSFSLLAATFHLRHFSAGGNFARKSDSNEPWWKESAQRMRNIGISAHIDSGKTTLTERVLYYTGRIHEIHEVRGRDGVGAKMDSMDLEREKGITIQSAATFCTWKDYKINIIDTPGHVDFTIEVERALRVLDGAVLVLCSVGGVQSQSITVDRQMKRYEVPRLAFINKLDRMGADPWKVLNQARSKLRHHSAAMQVPIGLEDDFKGLIDLVHLKAYYFHGSMGENIVAEEVPADMEALVSEKRRELIETVSEIDDKLAEAFLNDEPISAADLEEAVRRATISRKFIPVFMGSAFKNKGVQPLLDGVLSYLPCPIEVNNYALDQTKNEEKVELPGSPDGPLVALAFKLEEGRFGQLTYLRIYEGVIRKGDFIINVNTGKKIKYNELVAETFLLLIQVPRLVRMHSDEMEDIQDAHAGQIVAVFGVDCASGDTFTDGSVKYTMTSMNVPEPVMSLAVQPVSKDSGGQFSKALNRFQKEDPTFRVGLDPESGQTIISGMGELHLDIYVERIKREYKVDASVGKPRVNFRETVTQRADFDYLHKKQSGGQGQYGRVIGYIEPLPAGSPTKFEFENLLVGQAIPSNFIPAIEKGFKEAANSGSLIGHPVENLRVVLIDGAAHAVDSSELAFKMASIYAFRQCYTASRPVILEPVMLVELKVPTEFQGAVAGDINKRKGIIVGNDQEGDDSVITAHVPLNNMFGYSTALRSMTQGKGEFTMEYKEHSPVSNDVQIQLVNTYKGNKAAE 769
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal2g1605 769 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 63 338 IPR027417 -
Lal2g1605 769 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 64 341 IPR000795 GO:0003924|GO:0005525
Lal2g1605 769 SUPERFAMILY Translation proteins 305 471 IPR009000 -
Lal2g1605 769 Pfam Elongation factor G C-terminus 672 755 IPR000640 -
Lal2g1605 769 Pfam Elongation factor G, domain IV 548 667 IPR005517 GO:0005525
Lal2g1605 769 Gene3D - 554 757 IPR014721 -
Lal2g1605 769 Pfam Elongation Factor G, domain III 473 547 IPR041095 -
Lal2g1605 769 Gene3D Translation factors 348 479 - -
Lal2g1605 769 Gene3D - 54 343 IPR027417 -
Lal2g1605 769 Gene3D - 675 745 - -
Lal2g1605 769 ProSitePatterns Translational (tr)-type guanine nucleotide-binding (G) domain signature. 110 125 IPR031157 -
Lal2g1605 769 Gene3D Elongation Factor G (Translational Gtpase), domain 3 480 553 - -
Lal2g1605 769 CDD EFG_III 474 549 IPR009022 -
Lal2g1605 769 CDD EFG_mtEFG1_IV 552 665 IPR005517 GO:0005525
Lal2g1605 769 Pfam Elongation factor Tu domain 2 380 460 IPR004161 GO:0005525
Lal2g1605 769 SUPERFAMILY EF-G C-terminal domain-like 471 548 IPR035647 -
Lal2g1605 769 SUPERFAMILY EF-G C-terminal domain-like 671 762 IPR035647 -
Lal2g1605 769 CDD mtEFG1_II_like 367 461 - -
Lal2g1605 769 TIGRFAM small_GTP: small GTP-binding protein domain 66 237 IPR005225 GO:0005525
Lal2g1605 769 TIGRFAM EF-G: translation elongation factor G 63 761 IPR004540 GO:0003746|GO:0005525|GO:0006414
Lal2g1605 769 Hamap Elongation factor G [fusA]. 62 762 IPR004540 GO:0003746|GO:0005525|GO:0006414
Lal2g1605 769 PANTHER ELONGATION FACTOR G, MITOCHONDRIAL 1 769 IPR045044 -
Lal2g1605 769 SMART EFG_C_a 671 758 IPR000640 -
Lal2g1605 769 SUPERFAMILY Ribosomal protein S5 domain 2-like 548 670 IPR020568 -
Lal2g1605 769 CDD EF-G 68 340 - -
Lal2g1605 769 SMART EFG_IV_2 549 669 IPR005517 GO:0005525
Lal2g1605 769 PRINTS GTP-binding elongation factor signature 68 81 IPR000795 GO:0003924|GO:0005525
Lal2g1605 769 PRINTS GTP-binding elongation factor signature 117 125 IPR000795 GO:0003924|GO:0005525
Lal2g1605 769 PRINTS GTP-binding elongation factor signature 137 147 IPR000795 GO:0003924|GO:0005525
Lal2g1605 769 PRINTS GTP-binding elongation factor signature 153 164 IPR000795 GO:0003924|GO:0005525
Lal2g1605 769 PRINTS GTP-binding elongation factor signature 189 198 IPR000795 GO:0003924|GO:0005525
Lal2g1605 769 CDD mtEFG1_C 674 751 IPR035649 -
Lal2g1605 769 Pfam Elongation factor Tu GTP binding domain 65 338 IPR000795 GO:0003924|GO:0005525
Lal2g1605 769 PANTHER ELONGATION FACTOR G, MITOCHONDRIAL 1 769 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal2g1605 Lal-Chr2 18031057 18046639 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal2g1605 382 556 Eukaryotic Initiation Factors Gene Family AT3G22980 24.725 8.20e-09 57.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal2g1605 K02355 - gmx:100783315 1365.13