Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal2g1560 ATGGCACAAATCAACCTTGCATTTCTCTTTACTATGTTCTTTCTCTTTTCGTCTAATGCATCATCAATTGATTCATCCTTAGTCAACACCCAAAACAAAACCCTAACCCAAACCCAAACCCCATCAATGATCTTAATAGATTCCTCTTGCAGGGGCACACTGTACCAAGATCTATGCTTTCGTTGCCTAAGAAAATTTTCCAATTTCACCATTGATGGCCCTCAGCACTTAGCCCATGTAGCCCTTTCCGTGAGTCTTTACAAGGCACTAGACACAAGGGGTTACTTGTTGAAAGTAGCAAAAGAATTTGAAGCAATCAAGGATAACACTTTTGTGTATCAAACAGTGCTAGATTGTGTTAAACAAATCACTGATAGTGTAGATGAACTTAGCCAAGCCATCAAAGAACTTCGAAGGCTTAACAAACACAACGATTCGGGCATCAATGATGAGTTCTTGTGGCACATAAGTAACGTAGAGACATGGGTGAGCACTGCTTTAACAGATGCTAGTTATTGTGTAGAATCTTTCCCAGGTCATAGGATGAGTAAGAGAACTGCTTCTATTAAGGTTAAGGCTAAGAATGTTGCAGAAGTTACTAGTAATGCATTAGCCTTGTTTCATAGATATGCTTCTAGGTACCAAGCTGCAGCAGAAGCTAGAAACGCCAACAAGCATAACTAA 684 0.3977 MAQINLAFLFTMFFLFSSNASSIDSSLVNTQNKTLTQTQTPSMILIDSSCRGTLYQDLCFRCLRKFSNFTIDGPQHLAHVALSVSLYKALDTRGYLLKVAKEFEAIKDNTFVYQTVLDCVKQITDSVDELSQAIKELRRLNKHNDSGINDEFLWHISNVETWVSTALTDASYCVESFPGHRMSKRTASIKVKAKNVAEVTSNALALFHRYASRYQAAAEARNANKHN 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal2g1560 227 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 45 210 IPR035513 -
Lal2g1560 227 PANTHER PECTINESTERASE INHIBITOR-LIKE 3 214 - -
Lal2g1560 227 SMART PMEI_2 41 206 IPR006501 GO:0004857
Lal2g1560 227 TIGRFAM PME_inhib: pectinesterase inhibitor domain 26 210 IPR006501 GO:0004857
Lal2g1560 227 PANTHER BNAANNG18590D PROTEIN 3 214 - -
Lal2g1560 227 Coils Coil 120 140 - -
Lal2g1560 227 CDD PMEI-like_3 48 212 - -
Lal2g1560 227 Gene3D Invertase/pectin methylesterase inhibitor family protein 43 210 IPR035513 -
Lal2g1560 227 Pfam Plant invertase/pectin methylesterase inhibitor 45 206 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal2g1560 Lal-Chr2 16956859 16957542 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal2g1560 31 207 Carbohydrate Esterase AT1G53830 24.309 3.54e-07 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal2g1560 - - ccaj:109789012 260.766