Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal2g1549 ATGTATTTGCTTCTATATCTCCTTCTGAAACTTCAACTCTTCTTCATATATGTCTCACCATCACTTTCCTCTATGACTGAACTTGACACTCTTATGGCTATTAAGGACTCTCTAGATCCAGAAAATCATGTTTTGATGTCATGGACCCCACATGTTGACCCATGTAGTGGTGCTTTTGAGGGTGTGGCTTGCAATGAACAAGGCCTTGTTGCTAATATTTCACTGCAAGGAAAGGGTCTTTCTGGAACAATACCTGAAGCTATTGCTAGTCTTAAAAGTTTGACTGGTTTGTACCTTCATTTCAATGCATTGAATGGAATGTTACCAAAGGAGATTGCAAGTTTAACTGAGTTAAGTGATTTGTATCTGAATGTGAATAATCTCTCTGGGGATATCCCTCGAGAAATTGGTAATATGTCAAATCTTGAAGTTTTGCAGCTTTGTTACAACAAATTTAGTGGGAGCATACCTACAGAACTGGGAAATTTGAGAAAGCCTAGTGTTCTTGCACTGCAATATAATCGACTAAGTAGCGCGATCCCTGCAAGTTTGGGTGAGCTAGGAACATTAACAAGATTGGATCTAAGCTTCAATAACCTTTTTGGTCCTATTCCAGTGACATTGGCTAATGCACCTAAACTTGAAAGTCTAGATGTTCGAAACAATTCTCTTTCGGGGAGTGTCCCTGAAGGTAATCGATCCGAAAGGGATAAGATAATTTTTGAGAATTCATCTTCATTTCTTGTAGAAAACATGAATTTGTATGTTAATTCAGTTTTATCTCATTTATCTATTGATGCTGATGCAGCTCTTAAAAGACTGAAAGATGGGTTTCAGTACATCAACAATGCTGCATTATGTGGGATTGAATTTGCTGAGTTAGATTCTTGTATAGCTGTAGCAAGTTCAGACCCGACTAAACCCGAACCATATGAACCAAAAATTGAACCAAAATCGGTTAAACCAGAATCTAAAAACTGCAGTGAGACTAATTGTGAAAAGCCATCAGAATCTTCAAAAATTGGTATCATTTTTGGGGTAATTGGAGTACTTGTTGGTTGCATTGTTTTTGGATTTTCTGTGTTCTTATGGTACCGCGGTCGGAAACAGAAAGTTGAAAGCAATGCTGAAATTTCTGATAGCACGGTTAGTATTGGCCAGATAAAGGAAAGAAAAATTTCATGTCCTTTGATAAATTTGGAGTATTCTAATGGATGGGATCCATTAGCCAAAGGTAGAAGTGGTTATTCCCAAGAAGTTCTTGAGAGTTTTATGTTCAATCTCGAAGAAGTAGAGCGCGCAACTCAATGCTTCTCGGAGGTAAACTTGTTGGCGAAGGGTAGTTTTTCGGCTATTTTCCGAGGAATCTTGAGAGATGGATCAATTGTGGTAGTAAAGTGCATTGCCAAGACAAGGTGCAAGTCTGATGAAACTGAATTCTTGAAAGGGTTGAAAACAATGATATCATTAAAGCATGAAAATCTCGTTCGGTTGAGAGGCTTTTGCTGTTCGAAGGGACGCGGGGAATGCTTTTTGATTTACGAGTTTGCCTCTAATGGGAGTTTGTCACAGTATCTTGACCTTAAGAGAGGTGATTATAAGGTTCTTGAGTGGTCCACTAGAGTATCCATTATCAATGGTATTGCCAAAGGTATTGGTTATCTGCATGAAAATAAAGAAACCAAAAAAGCTCTAGTTCACCAAAACATATCAGCTGAAAAAGTGCTTCTAGACACTAGATACAATTCCATACTTGCAGATTCAGGATTGCACAAACTTCTAGCAGATGATGTTGTCTTTTCTACCCTCAAAGCTAGTGCAGCCATGGGATATCTGGCTCCAGAATATGCAACAACCGGTCGGCTAAACGAAAAGAGCGACATATACGCATTCGGTGTCATTGTTTTCCAGCTTCTTACTGGAAAACACAACATTTCTCAGTTAAATCTCCAACAAGTAGAAACAGATAATTTTAAAGAGATACTTGATGAGAATCTTGAAGGAAAGTTTTCAGAGTCAGAGGCAGAAAAACTTTGGAGCATTGCTTTGCTTTGCACACATGAATCTCTCAATCTTAGACCATCTATGAACAATGTAATGCAAGAACTGAGTACAGAATAA 2121 0.3824 MYLLLYLLLKLQLFFIYVSPSLSSMTELDTLMAIKDSLDPENHVLMSWTPHVDPCSGAFEGVACNEQGLVANISLQGKGLSGTIPEAIASLKSLTGLYLHFNALNGMLPKEIASLTELSDLYLNVNNLSGDIPREIGNMSNLEVLQLCYNKFSGSIPTELGNLRKPSVLALQYNRLSSAIPASLGELGTLTRLDLSFNNLFGPIPVTLANAPKLESLDVRNNSLSGSVPEGNRSERDKIIFENSSSFLVENMNLYVNSVLSHLSIDADAALKRLKDGFQYINNAALCGIEFAELDSCIAVASSDPTKPEPYEPKIEPKSVKPESKNCSETNCEKPSESSKIGIIFGVIGVLVGCIVFGFSVFLWYRGRKQKVESNAEISDSTVSIGQIKERKISCPLINLEYSNGWDPLAKGRSGYSQEVLESFMFNLEEVERATQCFSEVNLLAKGSFSAIFRGILRDGSIVVVKCIAKTRCKSDETEFLKGLKTMISLKHENLVRLRGFCCSKGRGECFLIYEFASNGSLSQYLDLKRGDYKVLEWSTRVSIINGIAKGIGYLHENKETKKALVHQNISAEKVLLDTRYNSILADSGLHKLLADDVVFSTLKASAAMGYLAPEYATTGRLNEKSDIYAFGVIVFQLLTGKHNISQLNLQQVETDNFKEILDENLEGKFSESEAEKLWSIALLCTHESLNLRPSMNNVMQELSTE 706
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal2g1549 706 SUPERFAMILY L domain-like 25 231 - -
Lal2g1549 706 Gene3D Ribonuclease Inhibitor 23 293 IPR032675 -
Lal2g1549 706 ProSiteProfiles Protein kinase domain profile. 438 706 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal2g1549 706 CDD STKc_IRAK 444 703 - -
Lal2g1549 706 PANTHER PROTEIN NSP-INTERACTING KINASE 2-LIKE 6 245 - -
Lal2g1549 706 PANTHER PROTEIN NSP-INTERACTING KINASE 2-LIKE 263 705 - -
Lal2g1549 706 MobiDBLite consensus disorder prediction 309 330 - -
Lal2g1549 706 Pfam Protein tyrosine and serine/threonine kinase 442 703 IPR001245 GO:0004672|GO:0006468
Lal2g1549 706 SUPERFAMILY Protein kinase-like (PK-like) 417 702 IPR011009 -
Lal2g1549 706 MobiDBLite consensus disorder prediction 303 331 - -
Lal2g1549 706 Pfam Leucine rich repeat N-terminal domain 27 65 IPR013210 -
Lal2g1549 706 Gene3D Transferase(Phosphotransferase) domain 1 518 706 - -
Lal2g1549 706 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 6 245 - -
Lal2g1549 706 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 263 705 - -
Lal2g1549 706 Gene3D Phosphorylase Kinase; domain 1 411 516 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal2g1549 Lal-Chr2 16690863 16695575 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal2g1549 1 551 Miscellaneous Gene Families AT4G22730 47.803 1.86e-171 500
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IV Lal2g1549 PK_Tyr_Ser-Thr 4.6e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal2g1549 - - qsu:111997683 868.611
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal2g1549 2 16690863 16695575 Lal2g1549 2 16690863 16695575 ECH