Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal2g1508 ATGGATCATGTAGCAGCACAAGGTCGTCCTCTCCCATCTTTTCTCACTAGAGATCTTCATTTAAACCCTTTCCATCAATTCCAACCCCATCACCAAGATAACAACAACACTGATGAAGATAACAACAATAGCAAGCACAACAACAACGACAACTTCTTAAACCGCAGCTTAAATCGAGGTCCAAATGAAAACACCACCACCAACAACAACACGGGCGCCACTTCCGCCACGGCGGACGGCAAAGAATTGAGCTCAACCTTGAGTCCAGGAGATGGTGACATGGGTACAATAAGAAGATCTAGAGGAAGACCAGCAGGGTCTAAGAACAAACCTCAGCAACCCATCATCATCAACAAAGACAGCGCCAACGCTCTCCGATCTCACGTCATCGAAATCAGCGACGGCTGCGACGTCATGGAAGGTATTACCGCCTATGCGCGACGAAGGCAGCGCGGGGTTTGCATCCTAAGCGGAAGCGGTGCTGTCACCAACGTCACCCTAAAGCAGCCGGCATCTGCCGGTGCGGTGGTGACACTACATGGAAGATTCGAGATCTTGTCATTGTCTGGCTCCTTCCTACCACCGCCTGCACCACCGGCTGCGTCCAGACTGGCTATATATCTTGCTGGTTCACAAGGTCAGGTGGTTGGCGGCTGCGTGGTGGGGCCCCTCTTGGCTTCCGGTCCACTGGTGATCATGGCCGCGTCGTTCGGTAATGCGACATATGAGCGACTGCCGTTGGAGGAGGAAGGGAGTTCTCCGGTGGCTGGTGGAGGAGGGTTAGGGTTAGGATCTTCTGGAATGGTACAACAAGAACATCAGCAGCAACATCTAGAAGCAGATCATAACACATTTTCTGTGTATAATGGGGTTTCACATAATCTTCTCAATTCATTTGAATTACCTGCAGCTACTGGTTCAGCTGAAGGGGGTTTCTGGGGTGGCAATGGAAGTGGACGCCCTTCTTTTTAA 972 0.5103 MDHVAAQGRPLPSFLTRDLHLNPFHQFQPHHQDNNNTDEDNNNSKHNNNDNFLNRSLNRGPNENTTTNNNTGATSATADGKELSSTLSPGDGDMGTIRRSRGRPAGSKNKPQQPIIINKDSANALRSHVIEISDGCDVMEGITAYARRRQRGVCILSGSGAVTNVTLKQPASAGAVVTLHGRFEILSLSGSFLPPPAPPAASRLAIYLAGSQGQVVGGCVVGPLLASGPLVIMAASFGNATYERLPLEEEGSSPVAGGGGLGLGSSGMVQQEHQQQHLEADHNTFSVYNGVSHNLLNSFELPAATGSAEGGFWGGNGSGRPSF 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal2g1508 323 MobiDBLite consensus disorder prediction 248 277 - -
Lal2g1508 323 Gene3D - 125 255 - -
Lal2g1508 323 Pfam Plants and Prokaryotes Conserved (PCC) domain 126 238 IPR005175 -
Lal2g1508 323 ProSiteProfiles PPC domain profile profile. 122 258 IPR005175 -
Lal2g1508 323 MobiDBLite consensus disorder prediction 46 84 - -
Lal2g1508 323 PIRSF ESCAROLA 17 323 IPR014476 GO:0003680
Lal2g1508 323 CDD DUF296 126 193 IPR005175 -
Lal2g1508 323 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 5 322 IPR014476 GO:0003680
Lal2g1508 323 MobiDBLite consensus disorder prediction 25 116 - -
Lal2g1508 323 SUPERFAMILY AF0104/ALDC/Ptd012-like 122 252 - -
Lal2g1508 323 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 18 5 322 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal2g1508 Lal-Chr2 15497950 15498921 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal2g1508 58 323 AT-hook Motif Nuclear Localized (AHL) Family AT3G60870 51.866 9.70e-69 214
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal2g1508 - - lang:109359498 393.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal2g1508 2 15497950 15498921 Lal2g1508 2 15497950 15498921 ECH