Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal2g1407 ATGGATGAGACGCTAAGAGTCATTTGCTATCAGTCTTGGAAGTCTCGCTTGAGCGAGAGATTCTCGCCTGAGCGAGAAAGGATCACCTGGGAGGGTGAAATCCTGGGCTATACTGGAGGATTCTCGCCTGAGCGAGAGTTGTCTCGCCTGGGCGAGAAATGGCAATTTGGGGCTGTTGACACTAAATGGTATGTTGGGGCTGTTGGCATTGTGAGACTCTCGCCTGAGCAAGAGCGTCAGATCATAGGAGCTAAATACTTCAAGGCTGATGGAAATCCTGACCCATCAGATATATTATCTCCTATAGATGTTGATGGCCATGGCACTCATACTGCATCAACAGCTGCAGGCAATCTAATCCAAGATGCAAGTCTCTTTGGGCTGGCCAATGGGACAGCTCGTGGCGCTGTGCCATCGGCTCGGTTGGCAATTTACAAAGTCTGCTGGTCATTAAGTGGATGTGCAGACATGGACATACTTGCTGCATTTGATGCTGCTATACACGATGGCGTTGATGTCATATCTATTTCCATTGGTGGAGGGGATACAAATTATATGACCGACTCCATATCAATTGGTGCATTTTTTGCCATGAGAAAACATATAATCATTGTGGCCTCAGCAGGAAACGGAAGTCCATCTATAGCAACTGTAACAAATACTGCACCATGGATTGTAACAGTTGCAGCTAGTGCTATTGATAGGGCTTTCAAGAGCACTGTGCAGTTGGGCAGTGGAAAGAACATTTCTGGTATAGGAGTGAGCTGTTTCAATCCAAAACGAAAACTATACCCTCTTGTCAATGGGATTGATGCAGCCAGGGACTCTGAAACGAAGGAGGATGCCAATTACTGCTATGAAGACTCATTGGATCCAATTATGGTGAATGGGAAACTTGTCTATTGCAAATTAGGATCATGGGGCACCAACGCCGTTTTGAAAGAAATTGGAGGCGTTGGTACTATACTTCAAAGTGGTCAATATCCTGATGTTGCTCAAATTTTCATGGCCCCTGCTACGATTGTGAATGATAGCATAGGAGGAATTGTTACAAATTATATAAAATCCACAAGGACACCATCCACAGTGATATATAAGAGTCGTGAAGTAAAAATTCCAGCTCCAATTGCTGCTACATTCTCATCTAGAGGTCCAAATCCAGGATCCCAACACATTCTCAAGCCTGATGTTGCGGCTCCTAGCATTGACATTTTGGCTTCTTATACCCTTAGGGACTCACTCACTGGTTTGAAAGGGGATACCCAATTTTCAGAATTTACACTAATGTCCGGGACTTCCATGGCATGTCCTCATGTTGCTGGAGTTGCAGCTTATGTGAAGTCATTTCACCCACATTGGAGTCCTGCTCCAATCAGGTCTGCTATTATTACCACATGTGAGATTAAATTAGAGCGGTACACCGTAAATTTAATCCTGAGAAATGAAATGTTTCAACTTGTTGCCTAA 1467 0.4431 MDETLRVICYQSWKSRLSERFSPERERITWEGEILGYTGGFSPERELSRLGEKWQFGAVDTKWYVGAVGIVRLSPEQERQIIGAKYFKADGNPDPSDILSPIDVDGHGTHTASTAAGNLIQDASLFGLANGTARGAVPSARLAIYKVCWSLSGCADMDILAAFDAAIHDGVDVISISIGGGDTNYMTDSISIGAFFAMRKHIIIVASAGNGSPSIATVTNTAPWIVTVAASAIDRAFKSTVQLGSGKNISGIGVSCFNPKRKLYPLVNGIDAARDSETKEDANYCYEDSLDPIMVNGKLVYCKLGSWGTNAVLKEIGGVGTILQSGQYPDVAQIFMAPATIVNDSIGGIVTNYIKSTRTPSTVIYKSREVKIPAPIAATFSSRGPNPGSQHILKPDVAAPSIDILASYTLRDSLTGLKGDTQFSEFTLMSGTSMACPHVAGVAAYVKSFHPHWSPAPIRSAIITTCEIKLERYTVNLILRNEMFQLVA 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal2g1407 488 CDD PA_subtilisin_like 240 364 - -
Lal2g1407 488 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 79 466 IPR045051 -
Lal2g1407 488 SUPERFAMILY Subtilisin-like 86 467 IPR036852 GO:0004252|GO:0006508
Lal2g1407 488 Gene3D - 234 370 - -
Lal2g1407 488 ProSiteProfiles Serine proteases, subtilase domain profile. 1 488 - -
Lal2g1407 488 ProSitePatterns Serine proteases, subtilase family, serine active site. 431 441 IPR023828 -
Lal2g1407 488 Gene3D Peptidase S8/S53 domain 77 468 IPR036852 GO:0004252|GO:0006508
Lal2g1407 488 PRINTS Subtilisin serine protease family (S8) signature 103 116 IPR015500 -
Lal2g1407 488 PRINTS Subtilisin serine protease family (S8) signature 430 446 IPR015500 -
Lal2g1407 488 Pfam Subtilase family 101 466 IPR000209 GO:0006508|GO:0008236
Lal2g1407 488 PANTHER SUBTILISIN-LIKE PROTEASE SBT4.14 79 466 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal2g1407 Lal-Chr2 12755209 12759167 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal2g1407 62 465 Subtilisin-like Serine Gene Family AT4G00230 64.109 8.49e-179 513
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal2g1407 - - gmx:100795950 625.55