Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal2g1383 ATGGATAACTATAACTCATCATCATCTTCATCATCATCTCCATACAGGTATCCTAACCCTTATCAACCATATCCTCCTCCCAACCCTTATCAACCATATCCTCCTCCCAACCCTTATCAACCATATCCTCCTCCTCTTCCAGGTCCTGATCCTTATGCACCTCATCATTATCCACCTCATCCTTATCCATATCCTTATACTTCTTCACATTCCTTCAACTATTCCTACCCTTCACCTCCTAGATCAACTTTTCCTTCTTCCCATTCTGGTCCTTTAGATTACTCCTCTCATCATCCTCCACAACCTCCTAGGTTAACCTCATCACCCACCCTCCCTTCTAGTCCATTGGATTATTCCTCCTATTCCCCTCCTCCCCTTCCTCATTCTTCCTCATCCTCAGACTTTAATCACCCTCCTCCCCATTTGGACATTCCTCGACCTCCTTCACCGTCGCCGTCTTATCCTTACCCTTACTATGTTCCTCCAGGGACTCATAGTCCTCCTCCTCCTCACCCTTCCTTTTCACACACAGCTAGTTTACCATATGGATCATCTCATTATTATTACCAGCAGACTGAGGCCTATCCACCTCCCGAAGATAGTTCTCAAGCCCATTCGCGCATTAATAGTTGTCCCTACCAACTGGAGAATGCGAGCTTCGTAGGAGGTGGAGTTTCGGTATCACAAAGTAGTGGTATTGATAATTCCAAGCCTTCTTACCCGACTTTGGATGATCTTATGGGCAATGTTCGGTTGTCTGATAGCCAGCCAAGTGCTCCTGTGTCGTTTTCTCATGCGCCTGCAGCACAACCATTCATGCATTCCATTTCAGTTCCTAAGTTGCAAGAGAAGAAAGATGAGTTTTATGGATATTCTAATAACTCCTTCTCCGGTTGGGGATCCTCTTATTCTGGTCGGCTGGATTCGTCTAAGCTTTCAAATTTTTCTGACTCATTTAATGGTTCGGTGCATAGTCAGTCTACGCAGGTTGTTCCATTGCAGAATAAAGGGTCCTTGAGAGTTTTGCTCCTACATGGAAATTTAGATATATGGATATATGGAGCGAAAAATCTTCCGAATATGGACATGTTCCACAAAACAATAGGGGATATGTTTGGTAGATTACCTGGTAGTGTGAGCAATAAAATTGAAGGAACTATAAATATTACCAGTGATCCTTATGTATCAATTTCAATATCAAATGCTGTAATTGGAAGGACTTATGTTATTAGCAACAGTGAAAATCCTGTTTGGATGCAACATTTCTATGTTCCTGTTGCTCATCATGCTGCAGAAGTACACTTTCTTGTTAAAGACAGTGATGTAGTCGGTTCACAGCTCATTGGAATTGTGGCAATTCCAGTGGAAAAAATATTCTCGGGGGAAAAAATAGAAGGTTCTTACCCTCTCCTGAATAACAATGGGAAGCCTTGTAAGCAAGGTGCTTCCCTGAGCCTTTCCATTCAGTACATCCCAATGGAAAGACTGAGCATTTATCATCAAGGAGTCGGAGCAGGGCCTGACTACATTGGGGTTCCTGGAACATATTTTCCTTTGCGGAAAGGTGGAAGTGTTACTTTATATCAAGATTCTCATGTTCCAGATGGATCCCTCCCCAATGTGCTGCTTGAAAATGGTATGTATTATGTGCACGGGAAGTGTTGGCTTGACATCTTCGATGCCATACGTCAAGCTCGGCGATTGATCTATATTACAGGGTGGTCCGTGTGGCACAAAGTTAAGTTAGTAAGAGATACTGCTGGCTTTGCACCAGATTATACTTTGGGCGAACTTCTGAAAACAAAGTCACAAGAAGGAGTTAGAGTGCTTCTCCTTATTTGGGACGATCCTACATCAAGAAGCATTTTGGGTTATCAAACAAATCCTCTGCTTAATGTTACACCAACTGGACAATTAACTTGTTACTGCCCTTGGACTTGGGTAGGTAGTAAAATGGCTAAAGATGGTGTCATGGCAACTCATGATGAAGAAACTCGACGATTTTTCAAGCACTCTTCAGTGCAAGTGCTGCTTTGTCCTCGCATCGCTGGAAAACGACTTAGCTGGATCAAACAAAAGGAAGTTGGAACTATATATACTCATCACCAGAAAACTGTAATTGTGGATGCTGATGCTGGAAATAACAGAAGAAAAATTGTTGCATTTGTTGGTGGACTTGATTTGTGTGATGGGCGATACGATACTCCCCACCATTCTATCTTTAGGACACTGCAGACACTACATAAAGATGACTATCACAACCCTACTTTCACGGGCAGGAACAAAGGGGAATCAGTTAAGAGGAAAGATAAAAGGGAGGAAAAGGGTAACACTGGTGGTTGTCCACGGGAGCCATGGCATGACTTGCATTCTAAAATTGATGGCCCAGCAGCTTATGATGTTTTGACTAATTTTGAGGAGCGCTGGTTAAAAGCTTCAAAACCTCATGGGATTAAAAAGTTGAAAATTTCATATGATGATGCTTTACTTAGGCTGGAAAGAATTCCAGATATTATCGGCATAAATGATGCTCCTAGTCTTGGTGATGATGATCTTGAAGCTTGGCATGTTCAGATATTTCGTTCAATTGATTCAAATTCTGTTAAGGGATTTCCGAAGGATCCAAAAGATGCAACCAGCAAGAACCTAGTATGTGGGAAAAATGTGCTGATTGACATGAGCATACATACAGCATATGTGAAGGCCATTCGTGCTGCACAGCATTTCATTTATATAGAGAATCAATATTTCATTGGGTCTTCATTCCATTGGAGTCAACATAAAGACCTTGGTGCTAATAATTTAATCCCTATGGAAATTGCTCTGAAGATTGCTGAAAAGATAAAGGCAAATGAGAGATTCGCTGTGTATATTGTTATTCCTATGTGGCCAGAGGGTGTTCCAACAGGGGCTGCCACACAAAGGATTCTGTTTTGGCAAGGACAAGGTGTGACATGGCCAATACTAGTAAGCTTTGACTCTAGAACAATTAGCAAGAGTGATATATTAGCGAAAAGTCTCTTCTTAAACTCAGATATGGCTACGAATAAAACTATGCAAATGATGTACGAGACGATTTACAAGGCCTTGGTTGAGGTTGGACTTGAAGCAGCATTCTCTCCACAAGACTATTTGAACTTCTTCTGCCTTGGCAATCGGGAGGCCGTAGATTTGTATGCTAATGTTAGTGTGTCTGGAACTCCTCCGCCAGCAAATAGTCCTCAAGCAATTAGTCGAAATAGCCGACGATTCATGATTTATGTTCATTCAAAAGGCATGATAGTTGATGATGAATATGTGATATTGGGGTCTGCAAACATCAACCAACGCTCTATGGAAGGAACAAGAGACAGTGAGATTGCAATGGGAGCTTACCAACCTAATCATACTTGGGAAAGAAAATACTGTCATCCACTTGGACAGATCCATGGATATAGGATGTCCCTTTGGGCAGAACATACAGGAACAATTGAAGAATGCTTCTTGCAACCTGAAAGCCTTGAATGTGTGAGAAGAGTTAGAGCAATGGGTGAAATGAACTGGAAACAGTTTGCAGCTGATGAAATAACAGAGATGAGAGGCCATCTACTCAAATACCCGGTTGAAGTTGATCGAAGGGGCCGAGTTAGATCCCTTCCTGGCCATGAAGAGTTTCCTGATGTGGGAGGGAAAATAATTGGATCGTTTCTTGCCATGAAGGAGAATCTAACCATTTGA 3717 0.4205 MDNYNSSSSSSSSPYRYPNPYQPYPPPNPYQPYPPPNPYQPYPPPLPGPDPYAPHHYPPHPYPYPYTSSHSFNYSYPSPPRSTFPSSHSGPLDYSSHHPPQPPRLTSSPTLPSSPLDYSSYSPPPLPHSSSSSDFNHPPPHLDIPRPPSPSPSYPYPYYVPPGTHSPPPPHPSFSHTASLPYGSSHYYYQQTEAYPPPEDSSQAHSRINSCPYQLENASFVGGGVSVSQSSGIDNSKPSYPTLDDLMGNVRLSDSQPSAPVSFSHAPAAQPFMHSISVPKLQEKKDEFYGYSNNSFSGWGSSYSGRLDSSKLSNFSDSFNGSVHSQSTQVVPLQNKGSLRVLLLHGNLDIWIYGAKNLPNMDMFHKTIGDMFGRLPGSVSNKIEGTINITSDPYVSISISNAVIGRTYVISNSENPVWMQHFYVPVAHHAAEVHFLVKDSDVVGSQLIGIVAIPVEKIFSGEKIEGSYPLLNNNGKPCKQGASLSLSIQYIPMERLSIYHQGVGAGPDYIGVPGTYFPLRKGGSVTLYQDSHVPDGSLPNVLLENGMYYVHGKCWLDIFDAIRQARRLIYITGWSVWHKVKLVRDTAGFAPDYTLGELLKTKSQEGVRVLLLIWDDPTSRSILGYQTNPLLNVTPTGQLTCYCPWTWVGSKMAKDGVMATHDEETRRFFKHSSVQVLLCPRIAGKRLSWIKQKEVGTIYTHHQKTVIVDADAGNNRRKIVAFVGGLDLCDGRYDTPHHSIFRTLQTLHKDDYHNPTFTGRNKGESVKRKDKREEKGNTGGCPREPWHDLHSKIDGPAAYDVLTNFEERWLKASKPHGIKKLKISYDDALLRLERIPDIIGINDAPSLGDDDLEAWHVQIFRSIDSNSVKGFPKDPKDATSKNLVCGKNVLIDMSIHTAYVKAIRAAQHFIYIENQYFIGSSFHWSQHKDLGANNLIPMEIALKIAEKIKANERFAVYIVIPMWPEGVPTGAATQRILFWQGQGVTWPILVSFDSRTISKSDILAKSLFLNSDMATNKTMQMMYETIYKALVEVGLEAAFSPQDYLNFFCLGNREAVDLYANVSVSGTPPPANSPQAISRNSRRFMIYVHSKGMIVDDEYVILGSANINQRSMEGTRDSEIAMGAYQPNHTWERKYCHPLGQIHGYRMSLWAEHTGTIEECFLQPESLECVRRVRAMGEMNWKQFAADEITEMRGHLLKYPVEVDRRGRVRSLPGHEEFPDVGGKIIGSFLAMKENLTI 1238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal2g1383 1238 MobiDBLite consensus disorder prediction 110 137 - -
Lal2g1383 1238 ProSiteProfiles C2 domain profile. 324 468 IPR000008 -
Lal2g1383 1238 Pfam C2 domain 346 470 IPR000008 -
Lal2g1383 1238 SMART pld_4 1084 1111 IPR001736 GO:0003824
Lal2g1383 1238 SMART pld_4 697 732 IPR001736 GO:0003824
Lal2g1383 1238 MobiDBLite consensus disorder prediction 140 175 - -
Lal2g1383 1238 PANTHER PHOSPHOLIPASE D 1015 1238 IPR015679 -
Lal2g1383 1238 PANTHER PHOSPHOLIPASE D 654 982 IPR015679 -
Lal2g1383 1238 PANTHER PHOSPHOLIPASE D 247 630 IPR015679 -
Lal2g1383 1238 MobiDBLite consensus disorder prediction 1 17 - -
Lal2g1383 1238 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 697 732 IPR001736 GO:0003824
Lal2g1383 1238 SUPERFAMILY Phospholipase D/nuclease 879 1170 - -
Lal2g1383 1238 MobiDBLite consensus disorder prediction 18 60 - -
Lal2g1383 1238 Gene3D Endonuclease Chain A 550 828 - -
Lal2g1383 1238 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 344 492 IPR035892 -
Lal2g1383 1238 MobiDBLite consensus disorder prediction 77 177 - -
Lal2g1383 1238 Pfam Phospholipase D Active site motif 1085 1111 IPR001736 GO:0003824
Lal2g1383 1238 Pfam Phospholipase D Active site motif 698 732 IPR001736 GO:0003824
Lal2g1383 1238 MobiDBLite consensus disorder prediction 752 786 - -
Lal2g1383 1238 CDD C2_plant_PLD 341 491 - -
Lal2g1383 1238 MobiDBLite consensus disorder prediction 1 60 - -
Lal2g1383 1238 MobiDBLite consensus disorder prediction 77 94 - -
Lal2g1383 1238 Gene3D Endonuclease Chain A 861 1141 - -
Lal2g1383 1238 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 1084 1111 IPR001736 GO:0003824
Lal2g1383 1238 Gene3D C2 domain 344 498 IPR035892 -
Lal2g1383 1238 PANTHER PHOSPHOLIPASE D ALPHA 1 247 630 - -
Lal2g1383 1238 PANTHER PHOSPHOLIPASE D ALPHA 1 1015 1238 - -
Lal2g1383 1238 PANTHER PHOSPHOLIPASE D ALPHA 1 654 982 - -
Lal2g1383 1238 Pfam Phospholipase D C terminal 1158 1228 IPR024632 -
Lal2g1383 1238 SMART C2_3c 347 467 IPR000008 -
Lal2g1383 1238 SUPERFAMILY Phospholipase D/nuclease 549 814 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal2g1383 Lal-Chr2 12256808 12269468 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal2g1383 87 1238 Phospholipase D Gene Family (Wang group) AT2G42010 63.483 0.0 1443
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal2g1383 K01115 - gmx:100801286 1690.24