Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal2g1382 ATGAATATGATGAGAAGATTGAAAAGCATTGCTTCTGGGAGGACTTCCATTTCATCAGATCCTGGAGGAGATTCTATCACCAAAAAAACCAAGTTTGATCAAGACAATGATGTGAAAGTCATTGAGAAAAAAAATCCTATTGAGAGGGGCGACAAAGATGAGGGACAACATGTAGATGCATCAAGAGAAACTACGGTTGGAAAATCTAATTCCATTGTTTCTACCGTAGCAAGAGCTGAGAAAGAATTACATGAAATGAAAATTAGAGATGAGAAGGGCAAAACCAACGATGAAAAGGATATGGAGGCAACTGTTGTGAATGGAAATGGAACAGAAACAGGTCAAATAATTACAACTGCTATCGGTGGTCGAGATGGACAACCAAAGAGGACAATCTCATATAAGGCTGAACGTGTGGTTGGTACCGGTTCTTTCGGAGTTGTTTATCAGGCTAAGTGCCTTGAAACTGGTGAAGCAGTTGCAATAAAGAAGGTGTTGCAGGACAAGAGATATAAGAATAGGGAACTCCAGGTTATGCGTATGCTTGACCATACTAACGTTCTAAAACTAAAGCACTGTTTCTATTCAACAGCCGATAAAGATGAGGTGTACCTTAACCTAGTTTTGGAGTATGTACCTGAAACTGTATACAGAGTTTCAAAGCACTATATAAGGATGCACCAGAACATGCCTATCCTTTTAGTGAAATTGTATACATACCAGATATGTCGCGGCTTAAATTATATGCACCACGTGATTGGTGTCTGTCATCGTGACATCAAACCCCAAAATATATTGGTTAATCCCCAAACTCATCAGATAAAAATATGTGATTTTGGGAGTGCAAAGATGTTGGTGCCTGGTGAACCCAACATATCATACATATGCTCGCGATATTATAGAGCTCCAGAACTTATATTTGGGGCAACAGAATACACAAATGCGATCGATGTTTGGTCTGCTGGTTGTGTATTGGCTGAACTACTTCTAGGCCAGCCAATGTTTCCCGGAGATAGTGGTGTTGATCAATTGGTCGAGATAATTAAGATCCTGGGATCACCAACCAGAGAAGAAGTAAGGTGCATGAACCCAAATTACACGGAATTTAAGTTTCCTCAGATAAAAGCGCATCCATGGCACAAGGTTTTTCACAAAACGGTGCCTTCTGAAGCAGTCGATCTTGCATCTAGGATGCTTCAGTATTCGCCTAATCTACGTTGCACAGCTTTGGAAGCATGTGCACACCCCTTCTTTGATGATCTGCGAGACCCGAAAATATCCTTGCCGAATGGGCGAGCAATGCTTTCTTTGTTTGATTTCACAGCTCAAGAACTTGCAGGCGCACCTGATGAGTTGCGTCGCCGTCTCATTCCAGATCATGCAAGGAGTTGA 1392 0.4145 MNMMRRLKSIASGRTSISSDPGGDSITKKTKFDQDNDVKVIEKKNPIERGDKDEGQHVDASRETTVGKSNSIVSTVARAEKELHEMKIRDEKGKTNDEKDMEATVVNGNGTETGQIITTAIGGRDGQPKRTISYKAERVVGTGSFGVVYQAKCLETGEAVAIKKVLQDKRYKNRELQVMRMLDHTNVLKLKHCFYSTADKDEVYLNLVLEYVPETVYRVSKHYIRMHQNMPILLVKLYTYQICRGLNYMHHVIGVCHRDIKPQNILVNPQTHQIKICDFGSAKMLVPGEPNISYICSRYYRAPELIFGATEYTNAIDVWSAGCVLAELLLGQPMFPGDSGVDQLVEIIKILGSPTREEVRCMNPNYTEFKFPQIKAHPWHKVFHKTVPSEAVDLASRMLQYSPNLRCTALEACAHPFFDDLRDPKISLPNGRAMLSLFDFTAQELAGAPDELRRRLIPDHARS 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal2g1382 463 MobiDBLite consensus disorder prediction 1 67 - -
Lal2g1382 463 CDD STKc_GSK3 129 421 IPR039192 -
Lal2g1382 463 PANTHER SHAGGY-LIKE KINASE 6 463 - -
Lal2g1382 463 ProSiteProfiles Protein kinase domain profile. 134 418 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal2g1382 463 SMART serkin_6 134 418 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal2g1382 463 Pfam Protein kinase domain 134 418 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal2g1382 463 PANTHER GLYCOGEN SYNTHASE KINASE-3 ALPHA 6 463 - -
Lal2g1382 463 ProSitePatterns Serine/Threonine protein kinases active-site signature. 255 267 IPR008271 GO:0004672|GO:0006468
Lal2g1382 463 ProSitePatterns Protein kinases ATP-binding region signature. 140 164 IPR017441 GO:0005524
Lal2g1382 463 Gene3D Phosphorylase Kinase; domain 1 119 213 - -
Lal2g1382 463 MobiDBLite consensus disorder prediction 26 61 - -
Lal2g1382 463 MobiDBLite consensus disorder prediction 9 25 - -
Lal2g1382 463 Gene3D Transferase(Phosphotransferase) domain 1 214 462 - -
Lal2g1382 463 SUPERFAMILY Protein kinase-like (PK-like) 133 441 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal2g1382 Lal-Chr2 12198470 12203841 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal2g1382 140 421 Core Cell Cycle Gene Families AT1G76540 36.242 4.85e-56 187
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_GSK Lal2g1382 Pkinase 6.1e-66 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal2g1382 K00924 - gmx:100786458 796.193