Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal2g1335 ATGATGGATGAAGACAAGAACAACAATGAGGATAGAAATAAAGGAATCATGGGTTGCTGTGATTCAAAAGAAGGAAGCTTTCAAGCAAAAAGAAGCATAGCTGAGAGAAGAGGGTTCAGTTCCAATGCAGCCAAAATTAACACATCACTTTTTAGAACAATCACAACTCCAACATCATCAAGTTTAAACCCTTTGGGTTCTTCTTGTCCTTCACTTGCTGTTTCTCGATCACCTTGTTTCACCATTCCACCTGGCATTAGTCCCACTGCTCTTCTTGATTCACCAATTATGCTCCCTAATTCTCAGGCCATGCCATCACCCACCACTGGGACTTTCTTCCAATTGCCTATGTTCACTAATCAGCAATCAATGATGAATTATGAACAAAGGAAAATAGATGATAATTTGAGAACTGCTACTGATGCTGCTGTTGCTTCCTTTAAATTCAAGCCCCATGCCACCAATGTAGATCCAAAATCTTTGTCTCACTTCTCTACTTCTCTAAATCAGGTTTCTAATAATTGCAACATGATGAATGGAAGAAATTCAGACACCCAGCATGTCCAAGTTCAACCATCACTTGATTTTTCTGTCAGTACAGATTTTCCAAAACGATATGACTTTGATGCTCATTTGTACAATGATGTGAAAATGGTAGATGATGCTTATGTTAATGCTAGTAATTCTGATACTCTAATGTCTCATTCTGAGGATGGTAGTGAAGAAAGCACGCAACCTAAAAATGTTATCCAAGGTAGTGATATTGAACAGCACCCTGTCTTGGAAGAAGACCAGAAAGAAACATCCCATGCAACAGAAATTGTAAGGTCCTCAGAGGATGGTTATAATTGGAGAAAATATGGACAAAAACAAGTAAAAGGTTGCGAGTATCCTAGGAGCTACTACAAATGTACACAACCTAATTGTCTTGTCAAGAAAAAGGTTGAAAGGTCCCATGATGGCCAAATAACAGCAATTATTTACAAGGGTTCTCATAACCATCTAAAACCACATAATATTCATCGAGGATCAGCACTTTCTAGTGATGAAATGTTAGATATGGGTGAAGCCAATGAAAGCGGTGTTAAAGTTGATGGTGGGTTGGTTTGGAGAAACATTCAATCCAGAATAAGAAATGCACAACAAGGTTTGGATTGGAAGGGTGATTTTCAGGAAAGGGCTTCTGCAGATTCTACTGGAACTCAGCTTTCAGATCCTATATCTACTTCCAAAGCTAAATCTCTATCTATGCTTGAAGCTGAGGACACTCCAGAACTTTCTTCAACACTTGCTAGTCATGATGGTAACGAAGATGGAACCACTCAAACACTAGCATCACATGAAGATGATTTTGAACATAATGAATCGCAGTCAAAAAGAAGGAAGAAAGAGAGCAACTTGGTTGAATCAAATTTGCCTCCGAGGGCTGTTCGTGAGCCAAGAGTGGTAATCCAAATTGAGACTGAAGTTGACATACTTGATGATGGTTACCGCTGGCGTAAGTATGGACAGAAGGTTGTCAAAGGAAATCCAAACCCCAGGAGCTACTACAAATGCACAAGTGCTGGATGTCCTGTGAGGAAACATGTGGAAAGGGCTTCACACAATATAAAATATGTACTTACAACTTATGAAGGAAAACATAATCATGGTGTCCCTACTGCTAGAAATAACAATCATTTTAGGTCAAATGATGGGCGTTTACCTCCTGGTAGTTCTAATGGTCAAATGGCTCTTAATTTAACTGGAAATGCAAGTATCCCAAACCCTGAAAGTCTTGCACCTCATTTTGATAGAAAACCTGAAATTAGCAATGAGTTTCTGAGGTCCAATTTGGTTGGAAGTTTCACTAGTGATATGAAGTTTGGACCTTCTTCCATGTACCAAATGAAATATTCTTCCTTGAATAACACCATGCCTTATGGCTCCTATGGATTGAACCATGATGGTCGTGCAGCCCCTCAAGGTGGATCACTTTCTTCAGTGTTCCCTGATTATTCCATGCCACCGACTCTTCCTTCTTCTGGAAATTTTTCAATGAATGGTATTAATTTTAACCGTGTGAGACCAATGGGTCCTGTTCATCAATCTTTTCACTCAGGTCAGCACGTGAAGGAGATTGATTCAGGGTTCATGAGGCCTAAACAAGAGCAGAAGGATGATATGATGTATAGTTCATGTTTACCACCGCTTGATCATGCAAATTCTTCACACGCTTCTTCATCAGCATCACCATCGATTTATCAACGTGCCATGCAAAACTTTCCTGCATAA 2274 0.3953 MMDEDKNNNEDRNKGIMGCCDSKEGSFQAKRSIAERRGFSSNAAKINTSLFRTITTPTSSSLNPLGSSCPSLAVSRSPCFTIPPGISPTALLDSPIMLPNSQAMPSPTTGTFFQLPMFTNQQSMMNYEQRKIDDNLRTATDAAVASFKFKPHATNVDPKSLSHFSTSLNQVSNNCNMMNGRNSDTQHVQVQPSLDFSVSTDFPKRYDFDAHLYNDVKMVDDAYVNASNSDTLMSHSEDGSEESTQPKNVIQGSDIEQHPVLEEDQKETSHATEIVRSSEDGYNWRKYGQKQVKGCEYPRSYYKCTQPNCLVKKKVERSHDGQITAIIYKGSHNHLKPHNIHRGSALSSDEMLDMGEANESGVKVDGGLVWRNIQSRIRNAQQGLDWKGDFQERASADSTGTQLSDPISTSKAKSLSMLEAEDTPELSSTLASHDGNEDGTTQTLASHEDDFEHNESQSKRRKKESNLVESNLPPRAVREPRVVIQIETEVDILDDGYRWRKYGQKVVKGNPNPRSYYKCTSAGCPVRKHVERASHNIKYVLTTYEGKHNHGVPTARNNNHFRSNDGRLPPGSSNGQMALNLTGNASIPNPESLAPHFDRKPEISNEFLRSNLVGSFTSDMKFGPSSMYQMKYSSLNNTMPYGSYGLNHDGRAAPQGGSLSSVFPDYSMPPTLPSSGNFSMNGINFNRVRPMGPVHQSFHSGQHVKEIDSGFMRPKQEQKDDMMYSSCLPPLDHANSSHASSSASPSIYQRAMQNFPA 757
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal2g1335 757 MobiDBLite consensus disorder prediction 394 442 - -
Lal2g1335 757 Pfam WRKY DNA -binding domain 494 550 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lal2g1335 757 Pfam WRKY DNA -binding domain 279 334 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lal2g1335 757 Gene3D WRKY domain 480 546 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lal2g1335 757 SUPERFAMILY WRKY DNA-binding domain 487 553 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lal2g1335 757 SUPERFAMILY WRKY DNA-binding domain 277 336 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lal2g1335 757 MobiDBLite consensus disorder prediction 393 473 - -
Lal2g1335 757 MobiDBLite consensus disorder prediction 229 252 - -
Lal2g1335 757 ProSiteProfiles WRKY domain profile. 488 553 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lal2g1335 757 MobiDBLite consensus disorder prediction 1 18 - -
Lal2g1335 757 MobiDBLite consensus disorder prediction 716 746 - -
Lal2g1335 757 MobiDBLite consensus disorder prediction 443 468 - -
Lal2g1335 757 MobiDBLite consensus disorder prediction 1 21 - -
Lal2g1335 757 PANTHER WRKY TRANSCRIPTION FACTOR SUSIBA2-LIKE ISOFORM X1 18 731 - -
Lal2g1335 757 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 18 731 IPR044810 GO:0003700
Lal2g1335 757 MobiDBLite consensus disorder prediction 730 746 - -
Lal2g1335 757 SMART WRKY_cls 278 336 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lal2g1335 757 SMART WRKY_cls 493 552 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lal2g1335 757 ProSiteProfiles WRKY domain profile. 279 337 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lal2g1335 757 Gene3D WRKY domain 264 338 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal2g1335 Lal-Chr2 11130756 11135883 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal2g1335 33 556 WRKY Transcription Factor Family AT5G56270 40.410 1.54e-89 294
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lal2g1335 WRKY 3.5e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal2g1335 K18835 - gmx:100800211 905.205