Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal2g1311 ATGGGGAGGATTTTGGATATTGAAAGTGGAGATGAAGATGAAACTGTTTTGGTTCCGCCGTCGAATTTCTCTATGGTGGAGGAAGCCATTTTCCGATCAAGCTTCCCTCATCCTTCCAATTTCCCTTTCCTCCAAACCCTAAACCTGAGATCTATCATATACCTATGCCCTGAGCCATATCCTCATGAAAATCTGGAGTTCCTTCAATCACATAATATTCGTCTCTTTCAATTTGGAATTGAGGGAAAGAAGGAGAATTCTTCTCCTGTACGCAATAATTCTATCATGGAGGCTCTGAAAGTTTTAATTGATGTGAGAAATCACCCAGTTTTGATCCATTGTAAACAAGGAAAGCATAGAACAGGTTGCCTTGTTGGTTGCTTGCGTAAATTGCAGAACTGGTGTTTGTCTTCTGTGTTTGAGGAGTATCAGCGATTCGCTGGTGCTAAATCCAGGATAATGGATTTAACATTTATCGAAACGTTTGACATCTTAATCCTGAGACAGTGCCTTTACAGTATCATCTACCAATATCAAGGGTATGGTTCGAAGAAACGGCGGTTGTTGTATAAAGATGAGAGTTTACAGAAGCCCGGATTGACATCATTTTAG 612 0.4036 MGRILDIESGDEDETVLVPPSNFSMVEEAIFRSSFPHPSNFPFLQTLNLRSIIYLCPEPYPHENLEFLQSHNIRLFQFGIEGKKENSSPVRNNSIMEALKVLIDVRNHPVLIHCKQGKHRTGCLVGCLRKLQNWCLSSVFEEYQRFAGAKSRIMDLTFIETFDILILRQCLYSIIYQYQGYGSKKRRLLYKDESLQKPGLTSF 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal2g1311 203 ProSiteProfiles Dual specificity protein phosphatase domain profile. 22 173 IPR020422 GO:0006470|GO:0008138
Lal2g1311 203 PANTHER TYROSINE-PROTEIN PHOSPHATASE 12 186 - -
Lal2g1311 203 PANTHER TYROSINE-PROTEIN PHOSPHATASE DSP5 12 186 - -
Lal2g1311 203 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 17 164 IPR029021 -
Lal2g1311 203 CDD PFA-DSP_Siw14 17 163 - -
Lal2g1311 203 ProSitePatterns Tyrosine specific protein phosphatases active site. 112 122 IPR016130 GO:0016311|GO:0016791
Lal2g1311 203 PRINTS Plant and fungal dual specificity phosphatase signature 17 34 IPR020428 GO:0016791
Lal2g1311 203 PRINTS Plant and fungal dual specificity phosphatase signature 54 67 IPR020428 GO:0016791
Lal2g1311 203 PRINTS Plant and fungal dual specificity phosphatase signature 73 87 IPR020428 GO:0016791
Lal2g1311 203 PRINTS Plant and fungal dual specificity phosphatase signature 90 104 IPR020428 GO:0016791
Lal2g1311 203 Gene3D Protein tyrosine phosphatase superfamily 16 165 IPR029021 -
Lal2g1311 203 Pfam Tyrosine phosphatase family 17 166 IPR004861 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal2g1311 Lal-Chr2 10295836 10298470 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal2g1311 5 198 Protein tyrosine phosphatase (PTP) family AT3G02800 66.495 1.65e-99 285
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal2g1311 K18045 - gmx:100787713 331.257