Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal2g1301 ATGGTTTCTTTATCAACGCATCCCATTTTCCCTATTATCACACAAAACGGTGCGTTTCCTTCTGTTGCAGCTACAAAGAACCTTAATTCATTCAACAATCAACAGAGTAATAAGGATCTTCATAGAAAGTTTGTTTGTGCTTGCATCGCTCCTCCTCCTCGTAACTTTAAGAGTGAAAAAGACTCTTCCGCTATTAATTTCAACGGTTCATCTATATCAGAACAGTTAAGCACTGTGAGGGATCATGAGGATGATTCTGATGTTCTTATCGAGTGTAGAGAAGTGTACAAGTCATTTGGGGAAAAGAAAATCTTAAATGGTGTCAGCTTCAAGATCAGACATGGTGAAGCTGTTGGAATAATTGGTCCCTCTGGGACCGGAAAATCTACAGTTTTGAAGATTATTGCAGGACTTCTAGCTCCAGACAAGGGAGAAGTTTATATTCGAGGGAGAAAAAGAGTTGGTTTAATAAGTGACGAGGAGATATCTGGTCTTCGGATTGGATTAGTGTTCCAAAGTGCAGCACTTTTTGATTCTTTGACTGTTCGTGAAAATGTTGGTTTTCTCCTGTATGAAAAATCAAGCATGTCTGAGGACCAGATATCAGAGCTTGTCACGGAATGCTTGGCTGCGGTTGGATTGAAGGGAGTTGAGGATCGGTTGCCTTCTGAGTTATCAGGTGGGATGAAAAAACGAGTTGCCTTAGCTCGGTCTATTATTTATGATACTACAAAGGATTCAATTGAGCCAGAGGTGCTTTTGTATGATGAACCAACTGCTGGACTTGATCCCATTGCATCCACTGTTGTTGAGGATCTTATTCGTTCTGTGCACATAAAAGGATGTGATGCGCTTGGGAAACCTGGGAATATTGCATCTTATGTTGTTGTCACTCACCAACATAGTACTATTAAAAGAGCCATTGATAGGTTGTTGTTTCTACACAATGGAAAGCTTGTCTGGGAAGGAATGACTAGTGAATTTATGACTTCAACAAATCCAATTGTGCAGCAATTTGCTTCAGGGAGCCTGGATGGCCCTATCAAATATTAA 1053 0.4036 MVSLSTHPIFPIITQNGAFPSVAATKNLNSFNNQQSNKDLHRKFVCACIAPPPRNFKSEKDSSAINFNGSSISEQLSTVRDHEDDSDVLIECREVYKSFGEKKILNGVSFKIRHGEAVGIIGPSGTGKSTVLKIIAGLLAPDKGEVYIRGRKRVGLISDEEISGLRIGLVFQSAALFDSLTVRENVGFLLYEKSSMSEDQISELVTECLAAVGLKGVEDRLPSELSGGMKKRVALARSIIYDTTKDSIEPEVLLYDEPTAGLDPIASTVVEDLIRSVHIKGCDALGKPGNIASYVVVTHQHSTIKRAIDRLLFLHNGKLVWEGMTSEFMTSTNPIVQQFASGSLDGPIKY 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal2g1301 350 PANTHER PROTEIN TRIGALACTOSYLDIACYLGLYCEROL 3, CHLOROPLASTIC 25 350 - -
Lal2g1301 350 Gene3D - 76 342 IPR027417 -
Lal2g1301 350 SMART AAA_5 114 318 IPR003593 -
Lal2g1301 350 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 88 332 IPR027417 -
Lal2g1301 350 ProSitePatterns ABC transporters family signature. 225 239 IPR017871 GO:0005524
Lal2g1301 350 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 90 341 IPR003439 GO:0005524
Lal2g1301 350 PANTHER PROTEIN TRIGALACTOSYLDIACYLGLYCEROL 3, CHLOROPLASTIC 25 350 - -
Lal2g1301 350 CDD ABC_Org_Solvent_Resistant 90 339 - -
Lal2g1301 350 Pfam ABC transporter 105 260 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal2g1301 Lal-Chr2 10183215 10192277 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal2g1301 96 329 Calmodulin-binding Proteins AT2G36910 28.514 3.71e-15 75.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal2g1301 - - gmx:100789283 565.074
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal2g1301 2 10183215 10192277 Lal9g1451 9 16536086 16541822 LSH