Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal2g1269 ATGGGAAGGACACCTTGTTGTGATAAGAAGGGTTTAAAGAAAGGTCCATGGACACCTGAAGAAGATGAAATTCTTACTAACTATATCAACAAAAATGGTGGTCATGGAAGTTGGCGTTCTCTCCCTAAGTTAACAGGTCTTCTTCGTTGTGGTAAGAGTTGCAGGCTTAGGTGGACTAACTATCTTAGACCTGACATTAAACGTGGTCCCTTTACTGTTGAGGAAGAAAAACTAGTCATTCACCTTCATGGAATCCTAGGAAATAGGTGGGCTGCTATTGCATCAGAGTTACCGGGAAGAACCGACAATGAGATAAAGAACTTATGGAACACCCACTTGAAGAAACGTATAAAAAGCCACCAGCCACTGTCCTCATCACGTTCTTACAGTGTTGGCAAGGCACATGCTACTGCATCTCTTTCAACGCGTCACATGGCTCAGTGGGAAAGTGCTAGGCTTGAAGCTGAGGCCAGACTCTCAACTCAGTCATCACTCTTCAACTTCAATGACAGCAATAATAATGCCAATACTCATAATTATTATTATGACTTCTTCCTCCGAATATGGAACTCTGAAGTAGGAGAAGCATTTCGTAGTAGTAATAATAATAATAATAATAATAATAATAATAATAATAATAATGGTGACAAATTAGATGATAATAATAACCAGAGTCCCATTTCTGCAGAGAAATGTGAATCAGTTTCAGCCATTACTGGAGAGTTAGGATTCACAAAATCATGTGCTGAAGATGTGAATGGGTTTTTTCATTGGTATGATTCATCAAGTTCTAATGAGTTAGATGAGTCATCTGACACTGCCTTTCACCTCTTGTTAGATTTTCCTATTAACAATGATATGAGCTTCTTAGAAGGAAACTCTTTTGTTTGTACCCTTTAG 900 0.3844 MGRTPCCDKKGLKKGPWTPEEDEILTNYINKNGGHGSWRSLPKLTGLLRCGKSCRLRWTNYLRPDIKRGPFTVEEEKLVIHLHGILGNRWAAIASELPGRTDNEIKNLWNTHLKKRIKSHQPLSSSRSYSVGKAHATASLSTRHMAQWESARLEAEARLSTQSSLFNFNDSNNNANTHNYYYDFFLRIWNSEVGEAFRSSNNNNNNNNNNNNNNGDKLDDNNNQSPISAEKCESVSAITGELGFTKSCAEDVNGFFHWYDSSSSNELDESSDTAFHLLLDFPINNDMSFLEGNSFVCTL 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal2g1269 299 MobiDBLite consensus disorder prediction 199 226 - -
Lal2g1269 299 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 62 IPR017930 -
Lal2g1269 299 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 291 - -
Lal2g1269 299 ProSiteProfiles Myb-like domain profile. 9 62 IPR001005 -
Lal2g1269 299 CDD SANT 16 62 IPR001005 -
Lal2g1269 299 ProSiteProfiles Myb-like domain profile. 63 113 IPR001005 -
Lal2g1269 299 SUPERFAMILY Homeodomain-like 11 109 IPR009057 -
Lal2g1269 299 Gene3D - 69 137 - -
Lal2g1269 299 SMART sant 67 115 IPR001005 -
Lal2g1269 299 SMART sant 13 64 IPR001005 -
Lal2g1269 299 PANTHER TRANSCRIPTION FACTOR MYB104-RELATED 1 291 - -
Lal2g1269 299 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 63 117 IPR017930 -
Lal2g1269 299 CDD SANT 70 113 IPR001005 -
Lal2g1269 299 Pfam Myb-like DNA-binding domain 68 113 IPR001005 -
Lal2g1269 299 Pfam Myb-like DNA-binding domain 14 62 IPR001005 -
Lal2g1269 299 Gene3D - 11 68 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal2g1269 Lal-Chr2 9941539 9945301 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal2g1269 1 293 MYB Transcription Factor Family AT3G61250 58.086 9.38e-110 318
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lal2g1269 Myb_DNA-binding 6.6e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal2g1269 K09422 - gmx:100800408 369.777