Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal2g1240 ATGCATTCAGTGTTATTCAAGGTTGAAGGGAACCATCGGCTACCGCCGACTACTCTTTCACCAGGAGACATGGTTTGTGTGAGAACCTGTGACAGCAAGGGTGCAGTTACAACTGCTTGCATGCAAGGATTTGTTGACAATCTTGGAGATGATGGCTGTACTATTAGTGTTGCTTTAGAGTCACTTCATGGTGATCCTACATTTTCTAAATTATTTGGGAAGAGTGTGCGCATTGACCGTTTCCAAGGACTGGCTGATGCTCTTACCTATGAGCGCAACTGTGAAGCCTTAATTCTGCTTCAGAAGAATGGTTTGTGCAAGAACAATCCTTCAATTTCTATTGTGGCTACACTATTTGGACACAGGGAAGATGTTGAATGGCTTGAGAAGAATCATGTGGTTGACTGGGAAGAAGAAAATTTGAATGGACTATTAGGAAATGAAACCAATGATAATTCTCAACAGAGAACAATTGCTCTGGGTTTGAATAAGAAGAGGCCTGTGTTGGTTATCCAAGGACCTCCTGGTACTGGCAAGACTGGTATACTCAAGCATCTTATAGCATGTGCTGTTCAGCAAGGAGAAAGGGTTCTTGTTACAGCACCTACTAATGCAGCTGTTGACAATATGGTTGAAAAGCTTTCAAATGTTGGATTAAATATTGTGCGGGTTGGGAACCCAGCTCGTATATCAAAAACTGTGTCTTCAAAGTCTTTGGGAGATATTGTGAATGCTAAGCTTGTACCTTTTCGAGAAGAGTGTGAGAGGAAGAAATCGGATCTAAGGAAAGATCTAAGTCATTGTTTAAAGGATGACTCGCTAGCTGCGGGCATACGCCAACTTCTGAAACAGCTAGGAAAGTCGTTGAAGAAAAAGGAAAAGCAGACTATTAGTGAAGTTTTATCCAATGCTCAGGTTGTGCTTGCTACTAATACTGGAGCAGCCGATCCTTTGATTCGAAGGCTAGATACTTTTGACTTGGTTGTCATAGATGAAGCTGGACAAGCAATTGAACCCTCTTGTTGGATTCCTATATTGCAGGGAAAGCGTTGTATTCTTGCTGGTGATCAATGCCAACTTGCTCCTGTCATATTATCTAGAAAGGCCTTTGAAGGTGGTCTAGGAATATCTCTACTGGAGAGAGCTACAACTTTGCATGAAGGGGTTCTCACCACCAGATTAACAACACAATACCGTATGAATGATGCAATTTCTAGCTGGGCCTCAAAGGAGATGTATGGAGGATTGTTGAAATCTTCTGAGACTGTCTTTTCTCATCTTCTTGTAGACTCTCCTTTTGTTAAGCGTACATGGATAACACAATGCCCTCTACTATTGCTTGATACTAGAATGCCATATGGAATTCTGTCAGTTGGTTGTGAAGAGCGTCTAGACCCAGCTGGGACAGGGTCACTCTATAATGAAGGAGAAGCCAATATAGTTTTGCAGCATGTATTTTCCTTAATTCACTCTGGTGTTAACCCAACTGCTATTGTAGTACAATCCCCTTACGTTGCTCAAGTACAACTTTTGAGGGATATGCTTGATGAAATCCCAGAGGCTGCAGGTACTGAGGTTGCAACAATTGATAGCTTTCAAGGTCAGGAAGCTGATGCAGTAATTTTATCCATGGTACGGTCAAACACATTAGGAGCTGTTGGATTCCTTGGGGATAGCAGAAGAATCAACGTTGCCATCACAAGAGCACGCAAGCATGTAGCTGTGGTCTGTGACAGTTCAACCATATCCCAAAACACCTTCCTAGCAAGACTTCTGCGTCATATTCGACATTTTGGTAGGGTGAAGCATGTGGAACCAGGTAATTTTGGAGGGTCTGGACTTGAGATGGGTCCACTATTACCTTCAATTGATTAG 1875 0.424 MHSVLFKVEGNHRLPPTTLSPGDMVCVRTCDSKGAVTTACMQGFVDNLGDDGCTISVALESLHGDPTFSKLFGKSVRIDRFQGLADALTYERNCEALILLQKNGLCKNNPSISIVATLFGHREDVEWLEKNHVVDWEEENLNGLLGNETNDNSQQRTIALGLNKKRPVLVIQGPPGTGKTGILKHLIACAVQQGERVLVTAPTNAAVDNMVEKLSNVGLNIVRVGNPARISKTVSSKSLGDIVNAKLVPFREECERKKSDLRKDLSHCLKDDSLAAGIRQLLKQLGKSLKKKEKQTISEVLSNAQVVLATNTGAADPLIRRLDTFDLVVIDEAGQAIEPSCWIPILQGKRCILAGDQCQLAPVILSRKAFEGGLGISLLERATTLHEGVLTTRLTTQYRMNDAISSWASKEMYGGLLKSSETVFSHLLVDSPFVKRTWITQCPLLLLDTRMPYGILSVGCEERLDPAGTGSLYNEGEANIVLQHVFSLIHSGVNPTAIVVQSPYVAQVQLLRDMLDEIPEAAGTEVATIDSFQGQEADAVILSMVRSNTLGAVGFLGDSRRINVAITRARKHVAVVCDSSTISQNTFLARLLRHIRHFGRVKHVEPGNFGGSGLEMGPLLPSID 624
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal2g1240 624 Gene3D - 4 84 - -
Lal2g1240 624 PANTHER P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASES SUPERFAMILY PROTEIN 1 623 - -
Lal2g1240 624 SMART ultradead3 145 388 IPR014001 -
Lal2g1240 624 Pfam AAA domain 376 579 IPR041679 -
Lal2g1240 624 CDD SF1_C_Upf1 400 596 IPR041679 -
Lal2g1240 624 PANTHER DNA2/NAM7 HELICASE FAMILY MEMBER 1 623 - -
Lal2g1240 624 Gene3D - 85 382 IPR027417 -
Lal2g1240 624 CDD DEXXQc_SMUBP2 151 399 - -
Lal2g1240 624 Pfam AAA domain 151 366 IPR041677 GO:0004386
Lal2g1240 624 Gene3D - 398 606 IPR027417 -
Lal2g1240 624 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 151 587 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal2g1240 Lal-Chr2 9573826 9583199 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal2g1240 136 339 Core DNA Replication Machinery Family AT1G08840 28.155 9.86e-10 60.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal2g1240 - - aip:107625008 1079.32