Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal2g1236 ATGGAAAACAAAGTGGGATATGAGAATGATCTCAACCATATTGCAACAGAACTAAGATTGGGGTTGCCAGGTACAGAGGAAAAGGAAGAAAAAACCATGCAAGGTTTTGTTAAAAACAACAAAAGACAATTGCCAGAAAATTATGAACAATCTGTTTCCATTTCTAAGGACTCTAAAGGCCAACATGCACACTCTGATGCAGCCCCACCTGCTAAGGCAAAGATAGTTGGGTGGCCACCAATAAGATCCTACAGGAAAAACAGCTTGCAGGAAAGTGAGGGTGGTGGGATATTTGTGAAAGTGAGCATGGATGGAGCCCCTTATCTAAGAAAGATTGATTTGAAGGTTTATGGATGCTATGTTGAACTACTCAAAGCTCTTGAAACCATGTTCAAGTTGATCATAGGTGAATACTCTGAAAGAGAAGGTTATGAAGGATCTGAATATGCACCTACATATGAAGACAAAGATGGTGATTTGATGCTTGTGGGAGATGTACCATGGGACATGTTTATGACCACATGCAAAAGGCTAAGAATCATGAAAGGCTCAGAAGCTAAGGGTTTGGGGTGTGGTGTATAA 582 0.4055 MENKVGYENDLNHIATELRLGLPGTEEKEEKTMQGFVKNNKRQLPENYEQSVSISKDSKGQHAHSDAAPPAKAKIVGWPPIRSYRKNSLQESEGGGIFVKVSMDGAPYLRKIDLKVYGCYVELLKALETMFKLIIGEYSEREGYEGSEYAPTYEDKDGDLMLVGDVPWDMFMTTCKRLRIMKGSEAKGLGCGV 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal2g1236 193 MobiDBLite consensus disorder prediction 37 71 - -
Lal2g1236 193 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 1 190 IPR003311 GO:0005634|GO:0006355
Lal2g1236 193 Gene3D - 90 193 - -
Lal2g1236 193 SUPERFAMILY CAD & PB1 domains 86 182 - -
Lal2g1236 193 Pfam AUX/IAA family 50 190 IPR033389 -
Lal2g1236 193 MobiDBLite consensus disorder prediction 37 58 - -
Lal2g1236 193 PANTHER AUXIN-INDUCED PROTEIN 1 190 - -
Lal2g1236 193 ProSiteProfiles PB1 domain profile. 96 183 IPR000270 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal2g1236 Lal-Chr2 9525244 9527175 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal2g1236 99 189 B3 DNA Binding Superfamily AT2G46530 39.560 8.10e-12 61.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Lal2g1236 AUX_IAA 2.4e-51 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal2g1236 K14484 - gmx:100800212 287.345