Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal2g1228 ATGTTAATACTCAACTGTAATATACAAATTTGGATGTTGAAGATGGAGACTATGGGATACATTAAATTCCTTCAAGGCCAAGTTGAGGTAACCACATTAATACACATGGATCACTTTTTCTCTGAGAAATTTCTGGGTGAGATTTTCTTGGATGACCCACTTTTAGCTCCAAATCAAAGTGATTCTTTTGTTCAGTATTATTCACAGTACATGAAGGGTGAAGAAGCTTTTCCACATTCAAATCAAAGCGCATTTTCTCAATATAGAGACCAACCCAGAATTTGTTTGAGGGTAGAAAGTTCTCTAAATGGATCAAGTTCACAGAACATGAACAAGAGAATGATTGCTTTCTTGAAGAAAGGTTTGCCTGTAGAGAAAAATAAAGTAGCAGAATATGAAAAAGAACGTTGTTTCAGGCACATGATTAATGAAAGGATGAGAAGGCAGAGACAGAGAGAATGTTGCTTGGCCCTCCATTCTATATTACCTCATGGAACCAAAACAGATACTAATTCTGTAGTTCAAGTGGCTAGGAAGGAGATTCAACGGCTGCAAGGGTATAAAGAAGAATTGAAGGGGAAAATTGAATCAAATCTTGAAGCTATAGAGAGAAACAAAGTTGGGGGAAGAAAGGTTCAATATTTAAGAGTACCATATCCAGAATGTGGAATTGATTCAGTGATTGAGACCCTGAATTGCTTGAAAACCCTTGGAGTGGATACCAGAAGCATCAAATCAAATTTCTCCAAGGAGGAGTTGTTTGCGGTGTTTGAGATAGAAGAAAACAAGGTGTCTTAA 798 0.3697 MLILNCNIQIWMLKMETMGYIKFLQGQVEVTTLIHMDHFFSEKFLGEIFLDDPLLAPNQSDSFVQYYSQYMKGEEAFPHSNQSAFSQYRDQPRICLRVESSLNGSSSQNMNKRMIAFLKKGLPVEKNKVAEYEKERCFRHMINERMRRQRQRECCLALHSILPHGTKTDTNSVVQVARKEIQRLQGYKEELKGKIESNLEAIERNKVGGRKVQYLRVPYPECGIDSVIETLNCLKTLGVDTRSIKSNFSKEELFAVFEIEENKVS 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal2g1228 265 Pfam Helix-loop-helix DNA-binding domain 139 185 IPR011598 GO:0046983
Lal2g1228 265 PANTHER TRANSCRIPTION FACTOR BHLH92 59 261 - -
Lal2g1228 265 PANTHER TRANSCRIPTION FACTOR BHLH041-RELATED-RELATED 59 261 IPR044658 -
Lal2g1228 265 Coils Coil 174 194 - -
Lal2g1228 265 Gene3D - 135 213 IPR036638 GO:0046983
Lal2g1228 265 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 130 196 IPR036638 GO:0046983
Lal2g1228 265 SMART finulus 141 190 IPR011598 GO:0046983
Lal2g1228 265 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 135 184 IPR011598 GO:0046983
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal2g1228 36 260 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G43650 35.683 9.99e-32 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal2g1228 - - gmx:100815874 255.758