Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal2g1201 ATGGATTCACCGCAACCACCGCCATCGCCGCCGCTATCTGCGGCCGCCACTATTCTAGGAAAGTACCAAATATCGCGGTTCCTTGGTCGTGGCAGCTTCGCAAAGGTATACCAGGCACGATCCCTGATCGATGGGACCACCGTGGCGGCGAAGATCATTGACAAGTCAAAGACGGTGAATGGTGCCATGGAACCTCAGATCGTGAGGGAAATTGATGCCATGCGCCGCCTCCAGCACCACCCAAACATCCTCCGTATCAATGAGGTCATGGCGACAAAGACCAAGATCTACCTCATTGTCGAGTTTGCCGAAGGCGGCGAGCTTTTCTCCAAGATCGCCCACCACGGTAAGATGCCGGAGCTACTAGCGCGCCGTTATTTTCAGCAACTCGTCTTAGCTCTATGCTATTGCCACCACCATGGCGTAGCCCACCGTGACCTCAAGCCGCAGAACCTTCTCCTCGACGCCGACGGTAACCTCAAGGTCTCTGATTTTGGCCTCTCGGCATTACCGGAGCAGTTAAATGACGGCCTTCTTCACACGACTTGCGGCACGCCGGCGTACACCGCGCCTGAGATACTTGCCCGGCGGTTGTACGATGGCGCAAAAGCTGACGCTTGGTCGTGCGGGCTCATACTCTTCGTCCTTCTCGTTGGTCACCTCCCATTCGATGAAACAAACATTCTAGCGATGTGCAAGAAAATCAAAAACCGCGATTACGTGTTTCCGACGTGGATTTCGAAATCGGCACGACACATTATCTTTCGGCTTCTTGACCCAAACCCTAAAACGAGAATGAAGTTAGATTCCTTATTTGAGAACTCGTGGTTTAAGAAATCTTTGAAATTACAACCCAAGAATATGTTCGGGTTGAGTTTTAATTATGAGCCGATTTCGGGTTTAAGTTTGGGTTCGAGTAAGAATGCATTCGATATAATATCGATGTCATCCGGGTTAGATTTGAGGGGATTGTTTGAAACCACGTCTAATGAGAAAAGAGAAAAGAGTTTTTTTTCAAATAATAAGATGGAGGAAGTGGAGGCTAAGGTGAAGGAGGTTGGAGAGGTTTTGGGGTTTAAGGTGGAGCTTGGGAAAAGTGGTATAATTTTGTTAGAAAAAGGGAAGGTGGGTTTGGTTTTTGAGGTGTTTGAGATTGTGGCTAAGTTGCTGTTGGTGGTGGTTAAAATGATGAATGGTGGGATGAAATTTGAGGAGCCTCATTTGGAGGATTTGAAAATTGGACTCCATGATATTGTTCTTTGTTGGCATACCAATGAAGATCACAAGTACACTTTTTGTGAATCAATGGTGTCCCAACCCAATTATAAAATGACACCTAATTAA 1344 0.4732 MDSPQPPPSPPLSAAATILGKYQISRFLGRGSFAKVYQARSLIDGTTVAAKIIDKSKTVNGAMEPQIVREIDAMRRLQHHPNILRINEVMATKTKIYLIVEFAEGGELFSKIAHHGKMPELLARRYFQQLVLALCYCHHHGVAHRDLKPQNLLLDADGNLKVSDFGLSALPEQLNDGLLHTTCGTPAYTAPEILARRLYDGAKADAWSCGLILFVLLVGHLPFDETNILAMCKKIKNRDYVFPTWISKSARHIIFRLLDPNPKTRMKLDSLFENSWFKKSLKLQPKNMFGLSFNYEPISGLSLGSSKNAFDIISMSSGLDLRGLFETTSNEKREKSFFSNNKMEEVEAKVKEVGEVLGFKVELGKSGIILLEKGKVGLVFEVFEIVAKLLLVVVKMMNGGMKFEEPHLEDLKIGLHDIVLCWHTNEDHKYTFCESMVSQPNYKMTPN 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal2g1201 447 PANTHER SERINE/THREONINE KINASE 14 425 - -
Lal2g1201 447 SUPERFAMILY Protein kinase-like (PK-like) 18 295 IPR011009 -
Lal2g1201 447 Pfam NAF domain 307 362 IPR004041 GO:0007165
Lal2g1201 447 Gene3D Kinase associated domain 1, KA1 309 420 - -
Lal2g1201 447 SMART serkin_6 22 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal2g1201 447 ProSiteProfiles Protein kinase domain profile. 22 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal2g1201 447 ProSiteProfiles NAF domain profile. 302 326 IPR018451 GO:0007165
Lal2g1201 447 Pfam Protein kinase domain 22 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal2g1201 447 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 14 425 - -
Lal2g1201 447 ProSitePatterns Protein kinases ATP-binding region signature. 28 51 IPR017441 GO:0005524
Lal2g1201 447 ProSitePatterns Serine/Threonine protein kinases active-site signature. 142 154 IPR008271 GO:0004672|GO:0006468
Lal2g1201 447 Gene3D Transferase(Phosphotransferase) domain 1 13 308 - -
Lal2g1201 447 CDD CIPK_C 308 415 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal2g1201 Lal-Chr2 9032485 9034126 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal2g1201 4 425 Miscellaneous Gene Families AT3G23000 54.503 3.47e-158 452
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Lal2g1201 Pkinase 1.6e-65 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal2g1201 K12761 - gmx:100305372 551.977