Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal2g1193 ATGTCTATGTCTTTGTTCAGAAATGTGAAAAGTGATGATGTTTTACTTAACTTGTCCAACACCATAAGTATACCTTGTAAAAGGTGGCACAATGCTTTTGTTGCCATTTATTGTTCTAGAGCCCTCTTGTCTCATTTCAAATCCAATAAATATGAACCAAATTTGTCTTTACCTTATTCACCCTCTTACACTGTTGTTGATTTGAGCTCAAACCACTCCTTTCTTGTTGATCAAGCAACTCTTACATCCATTGTCCAAGACAAAAATTTGGAGAGCCTTGGAAGACTTGGTGGGGTGAAAAGGGTGGCTTCTGCACTTGGAACCAATGTTGAACAAGGAATCAAAGATGATAATATTGCTAATGATATTGCATGCAGACGTGAAGTGTTTGGTTCAAACACTTATCCTAAACCAGCTTCAAGGAGTTTTTTTCATTTCTTGGTGGAAGCATTGAAGGACCCCACTATTCTTATTCTTTTGGCTTGTGCTGCTCTATCACTTGGTTTTGGTATAAAGGAGAATGGCATTGAAGAAGGTTGGTATGATGGAGGGAGTATCTTTATTGCTGTATTTATTGTAATTGCTGTTTCTTGCATTAGCAATTTTAGGCAAAACAGGCAATTTGATAAGCTATCACAGGCTAGCAATGATATCGAATTTGTTGTGGTTCGAAGCGGCCGCCGCCGAAATGTGTCCATATTTGACATTGTTGTTGGTGATGTGGTGTGTTTGAAGATTGGTGATCAAGTTCCTGCTGATGGGTTATTTGTAGAAGGGCATTCTCTTCAAGTGGATGAGTCAAGCATGACAGGGGAGAGTGAGAATGTTGAAGTTAATTCCAATCATCATCCATTCTTGTTTTCTGGCACAAAAGTTGTAGATGGTTATGCTAAAATGCTTGTCACATCTGTTGGTATGAACACAACATGGGGCCAAATGATGAGCTCAATTAGCCATGACACCGATGAGCAGACACCGTTGCAAATGCGTCTCAACAGGCTTACTTCATCCATAGGAATGGTAGGTTTGGCTGTGGCTTTTCTAGTTCTTATTGTTTTACTCATTCGTTACTTTGTCGGGAAGACAACCGATGAGAATGGAAATAAAATGTTCAATGGGAGTAAGACCAAGTTTGATGACATAGTGAATGCAGTGGTAGGAATGGTAGCTGCCGCGGTCACTATCGTAGTCGTTGCAATTCCCGAAGGGTTGCCACTAGCTGTGACTCTTACGTTGGCTTATTCGATGAAGAAAATGATGGCTGACCAAGCAATGGTGAGGAAACTCTCTGCCTGTGAAACAATGGGGTCTGCTACCATAATTTGTACTGATAAGACAGGCACTCTCACACTGAACCAGATGAAAGTTACAAAGTTTTGGCTTGGCCAAAAATCTATAGAAGAGGGTCATTACACATCAATTGCTCCATATGTTCTAGGACTAATCCGAGAAGGCGTGGCACTTAACACAACAGGTAGTGTATACAAGTCTGAATTAGATTCTGTATTTGATTTTTCAGGTAGTCCAACAGAAAAGGCCATTCTTTCATGGGCTGTGTTGGATTTGAACATGGAAATGGAGCAATTGACACAGAATTGTGTTATGCTACAAGTGGAAGCCTTCAATTCAAAGAAGAAAATGAGTGGTGTTATGATCAGAAGGAAAGTAGATAACACAATCCATGCACATTGGAAAGGTGCAGCTGAGATGGTGCTTAAAATGTGTTCAAGATACTATGATGAATCTGGCATTCTTAAAGATCTTGACAACACAAATAGGTTGATATTGGAACAGATAATTCAAGGAATGGCAGCTAGCAGTCTTCGTTGTATCGCTTTTGCACATACATCAGTCGATGCTAATGAAGAACATCGAGATGACGAACAAAACAAGAAAGTGAAAGAAGAAGACCTGACCCTTCTAGGACTTGTAGGCATCAAGGATCCATGTCGTCCGGGGGTAAAGAAAGCTGTCGAAGCTTGCCAACAAGCAGGCGTAAACATCAAAATGATCACAGGTGACAACGTTTTCACCGCGAAAGCTATAGCAACCGAATGTGGTATACTCCAGCCGAATCAAGACACGGTGGGAGCAGTGGTGGAAGGAGAGGAATTTCGAAACTACACGCCCGAGGAAAGGTTAGACAAAGTCGATAAAATATGTGTGATGGCAAGATCCTCTCCCTTCGATAAACTTTTAATGGTTCAGTGCCTTAAACAAAAGGGTCACGTAGTAGCGGTCACCGGGGATGGCACAAACGATGCACCAGCATTGAAGGAAGCTGATATAGGACTTTCTATGGGGATACAAGGCACCGAAGTAGCTAAACAGAGTTCGGATATAGTCATCTTAGACGATAATTTCGCTTCGGTTGCGACAGTTTTAAGGTGGGGAAGATGTGTCTACAATAACATCCAAAAATTCATTCAATTCCAATTGACAGTAAATGTAGCTGCACTTGCAATTAACTTTGTTGCAGCAGTATCAGCAGGGGAAGTTCCACTAACAGCAGTTCAATTGCTTTGGGTAAATTTGATAATGGACACATTAGGTGCTCTTGCTCTAGCAACAGAAAAACCAACCATAGATTTGATGAAGAACCCACCAATTGGTAGAACTGAACCTTTGATCACTAACATCATGTGGAGGAATCTATTAGCACAAGCATTATATCAAATAACTATTCTCTTGACTCTACAATTCAATGGTGAAGCTATATTTAATGTGACTTCTAAGGTAAAAGATACATTGATTTTTAACACATTTGTGCTATGCCAAGTGTTCAATGAATTTAATGCAAGGAAGCTAGAGAAGATGAATGTTTTCAAGGGCATACATCATAACAAGTTATTTCTTAGCATTATTGGTATAACTATTGTACTTCAAGTAGTGATGGTTGAATTCCTTAAGAAATTTGCAGATACTGAGAGATTAAATTGGGGACAGTGGGGTGCATGTATTATAATTGCATCTATTTCTTGGCCTATTAGTTGGATTGTGAAGTTGGTACCTGTTCCACAGAAACCATTACTAAGTTTTCTCAAGATTAAGGGGTAA 3057 0.3994 MSMSLFRNVKSDDVLLNLSNTISIPCKRWHNAFVAIYCSRALLSHFKSNKYEPNLSLPYSPSYTVVDLSSNHSFLVDQATLTSIVQDKNLESLGRLGGVKRVASALGTNVEQGIKDDNIANDIACRREVFGSNTYPKPASRSFFHFLVEALKDPTILILLACAALSLGFGIKENGIEEGWYDGGSIFIAVFIVIAVSCISNFRQNRQFDKLSQASNDIEFVVVRSGRRRNVSIFDIVVGDVVCLKIGDQVPADGLFVEGHSLQVDESSMTGESENVEVNSNHHPFLFSGTKVVDGYAKMLVTSVGMNTTWGQMMSSISHDTDEQTPLQMRLNRLTSSIGMVGLAVAFLVLIVLLIRYFVGKTTDENGNKMFNGSKTKFDDIVNAVVGMVAAAVTIVVVAIPEGLPLAVTLTLAYSMKKMMADQAMVRKLSACETMGSATIICTDKTGTLTLNQMKVTKFWLGQKSIEEGHYTSIAPYVLGLIREGVALNTTGSVYKSELDSVFDFSGSPTEKAILSWAVLDLNMEMEQLTQNCVMLQVEAFNSKKKMSGVMIRRKVDNTIHAHWKGAAEMVLKMCSRYYDESGILKDLDNTNRLILEQIIQGMAASSLRCIAFAHTSVDANEEHRDDEQNKKVKEEDLTLLGLVGIKDPCRPGVKKAVEACQQAGVNIKMITGDNVFTAKAIATECGILQPNQDTVGAVVEGEEFRNYTPEERLDKVDKICVMARSSPFDKLLMVQCLKQKGHVVAVTGDGTNDAPALKEADIGLSMGIQGTEVAKQSSDIVILDDNFASVATVLRWGRCVYNNIQKFIQFQLTVNVAALAINFVAAVSAGEVPLTAVQLLWVNLIMDTLGALALATEKPTIDLMKNPPIGRTEPLITNIMWRNLLAQALYQITILLTLQFNGEAIFNVTSKVKDTLIFNTFVLCQVFNEFNARKLEKMNVFKGIHHNKLFLSIIGITIVLQVVMVEFLKKFADTERLNWGQWGACIIIASISWPISWIVKLVPVPQKPLLSFLKIKG 1018
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal2g1193 1018 Gene3D - 439 793 IPR023214 -
Lal2g1193 1018 SFLD Haloacid Dehalogenase 424 801 - -
Lal2g1193 1018 TIGRFAM ATPase-IIB_Ca: calcium-translocating P-type ATPase, PMCA-type 89 1005 IPR006408 GO:0005388|GO:0005524|GO:0016020|GO:0070588
Lal2g1193 1018 Pfam E1-E2 ATPase 219 420 - -
Lal2g1193 1018 PRINTS H+-transporting ATPase (proton pump) signature 596 614 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Lal2g1193 1018 PRINTS H+-transporting ATPase (proton pump) signature 748 764 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Lal2g1193 1018 PRINTS H+-transporting ATPase (proton pump) signature 780 805 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Lal2g1193 1018 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 721 829 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Lal2g1193 1018 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 385 466 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Lal2g1193 1018 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 186 357 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Lal2g1193 1018 Pfam haloacid dehalogenase-like hydrolase 440 762 - -
Lal2g1193 1018 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 449 646 IPR023299 GO:0000166
Lal2g1193 1018 ProSitePatterns E1-E2 ATPases phosphorylation site. 444 450 IPR018303 -
Lal2g1193 1018 PRINTS P-type cation-transporting ATPase superfamily signature 265 279 - -
Lal2g1193 1018 PRINTS P-type cation-transporting ATPase superfamily signature 442 456 - -
Lal2g1193 1018 PRINTS P-type cation-transporting ATPase superfamily signature 642 653 - -
Lal2g1193 1018 PRINTS P-type cation-transporting ATPase superfamily signature 664 674 - -
Lal2g1193 1018 PRINTS P-type cation-transporting ATPase superfamily signature 748 767 - -
Lal2g1193 1018 PRINTS P-type cation-transporting ATPase superfamily signature 772 784 - -
Lal2g1193 1018 PANTHER CALCIUM-TRANSPORTING ATPASE 14 996 - -
Lal2g1193 1018 Gene3D - 149 1002 - -
Lal2g1193 1018 PANTHER CATION TRANSPORTING ATPASE 14 996 - -
Lal2g1193 1018 CDD P-type_ATPase_Ca_PMCA-like 126 881 - -
Lal2g1193 1018 Gene3D - 122 318 - -
Lal2g1193 1018 SFLD p-type atpase 424 801 IPR044492 -
Lal2g1193 1018 SUPERFAMILY Calcium ATPase, transduction domain A 218 316 IPR008250 -
Lal2g1193 1018 Gene3D - 452 649 IPR023299 GO:0000166
Lal2g1193 1018 SUPERFAMILY Calcium ATPase, transmembrane domain M 97 1005 IPR023298 -
Lal2g1193 1018 SMART Cation_ATPase_N_a_2 92 171 IPR004014 -
Lal2g1193 1018 SUPERFAMILY HAD-like 440 853 IPR036412 -
Lal2g1193 1018 Coils Coil 519 539 - -
Lal2g1193 1018 Pfam Cation transporting ATPase, C-terminus 833 1003 IPR006068 -
Lal2g1193 1018 Pfam Cation transporter/ATPase, N-terminus 97 166 IPR004014 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal2g1193 Lal-Chr2 8963644 8966700 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal2g1193 13 1017 Primary Pumps ATPases AT3G22910 68.942 0.0 1316
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal2g1193 K01537 - gmx:100793918 1531.54