Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lal2g1193 | ATGTCTATGTCTTTGTTCAGAAATGTGAAAAGTGATGATGTTTTACTTAACTTGTCCAACACCATAAGTATACCTTGTAAAAGGTGGCACAATGCTTTTGTTGCCATTTATTGTTCTAGAGCCCTCTTGTCTCATTTCAAATCCAATAAATATGAACCAAATTTGTCTTTACCTTATTCACCCTCTTACACTGTTGTTGATTTGAGCTCAAACCACTCCTTTCTTGTTGATCAAGCAACTCTTACATCCATTGTCCAAGACAAAAATTTGGAGAGCCTTGGAAGACTTGGTGGGGTGAAAAGGGTGGCTTCTGCACTTGGAACCAATGTTGAACAAGGAATCAAAGATGATAATATTGCTAATGATATTGCATGCAGACGTGAAGTGTTTGGTTCAAACACTTATCCTAAACCAGCTTCAAGGAGTTTTTTTCATTTCTTGGTGGAAGCATTGAAGGACCCCACTATTCTTATTCTTTTGGCTTGTGCTGCTCTATCACTTGGTTTTGGTATAAAGGAGAATGGCATTGAAGAAGGTTGGTATGATGGAGGGAGTATCTTTATTGCTGTATTTATTGTAATTGCTGTTTCTTGCATTAGCAATTTTAGGCAAAACAGGCAATTTGATAAGCTATCACAGGCTAGCAATGATATCGAATTTGTTGTGGTTCGAAGCGGCCGCCGCCGAAATGTGTCCATATTTGACATTGTTGTTGGTGATGTGGTGTGTTTGAAGATTGGTGATCAAGTTCCTGCTGATGGGTTATTTGTAGAAGGGCATTCTCTTCAAGTGGATGAGTCAAGCATGACAGGGGAGAGTGAGAATGTTGAAGTTAATTCCAATCATCATCCATTCTTGTTTTCTGGCACAAAAGTTGTAGATGGTTATGCTAAAATGCTTGTCACATCTGTTGGTATGAACACAACATGGGGCCAAATGATGAGCTCAATTAGCCATGACACCGATGAGCAGACACCGTTGCAAATGCGTCTCAACAGGCTTACTTCATCCATAGGAATGGTAGGTTTGGCTGTGGCTTTTCTAGTTCTTATTGTTTTACTCATTCGTTACTTTGTCGGGAAGACAACCGATGAGAATGGAAATAAAATGTTCAATGGGAGTAAGACCAAGTTTGATGACATAGTGAATGCAGTGGTAGGAATGGTAGCTGCCGCGGTCACTATCGTAGTCGTTGCAATTCCCGAAGGGTTGCCACTAGCTGTGACTCTTACGTTGGCTTATTCGATGAAGAAAATGATGGCTGACCAAGCAATGGTGAGGAAACTCTCTGCCTGTGAAACAATGGGGTCTGCTACCATAATTTGTACTGATAAGACAGGCACTCTCACACTGAACCAGATGAAAGTTACAAAGTTTTGGCTTGGCCAAAAATCTATAGAAGAGGGTCATTACACATCAATTGCTCCATATGTTCTAGGACTAATCCGAGAAGGCGTGGCACTTAACACAACAGGTAGTGTATACAAGTCTGAATTAGATTCTGTATTTGATTTTTCAGGTAGTCCAACAGAAAAGGCCATTCTTTCATGGGCTGTGTTGGATTTGAACATGGAAATGGAGCAATTGACACAGAATTGTGTTATGCTACAAGTGGAAGCCTTCAATTCAAAGAAGAAAATGAGTGGTGTTATGATCAGAAGGAAAGTAGATAACACAATCCATGCACATTGGAAAGGTGCAGCTGAGATGGTGCTTAAAATGTGTTCAAGATACTATGATGAATCTGGCATTCTTAAAGATCTTGACAACACAAATAGGTTGATATTGGAACAGATAATTCAAGGAATGGCAGCTAGCAGTCTTCGTTGTATCGCTTTTGCACATACATCAGTCGATGCTAATGAAGAACATCGAGATGACGAACAAAACAAGAAAGTGAAAGAAGAAGACCTGACCCTTCTAGGACTTGTAGGCATCAAGGATCCATGTCGTCCGGGGGTAAAGAAAGCTGTCGAAGCTTGCCAACAAGCAGGCGTAAACATCAAAATGATCACAGGTGACAACGTTTTCACCGCGAAAGCTATAGCAACCGAATGTGGTATACTCCAGCCGAATCAAGACACGGTGGGAGCAGTGGTGGAAGGAGAGGAATTTCGAAACTACACGCCCGAGGAAAGGTTAGACAAAGTCGATAAAATATGTGTGATGGCAAGATCCTCTCCCTTCGATAAACTTTTAATGGTTCAGTGCCTTAAACAAAAGGGTCACGTAGTAGCGGTCACCGGGGATGGCACAAACGATGCACCAGCATTGAAGGAAGCTGATATAGGACTTTCTATGGGGATACAAGGCACCGAAGTAGCTAAACAGAGTTCGGATATAGTCATCTTAGACGATAATTTCGCTTCGGTTGCGACAGTTTTAAGGTGGGGAAGATGTGTCTACAATAACATCCAAAAATTCATTCAATTCCAATTGACAGTAAATGTAGCTGCACTTGCAATTAACTTTGTTGCAGCAGTATCAGCAGGGGAAGTTCCACTAACAGCAGTTCAATTGCTTTGGGTAAATTTGATAATGGACACATTAGGTGCTCTTGCTCTAGCAACAGAAAAACCAACCATAGATTTGATGAAGAACCCACCAATTGGTAGAACTGAACCTTTGATCACTAACATCATGTGGAGGAATCTATTAGCACAAGCATTATATCAAATAACTATTCTCTTGACTCTACAATTCAATGGTGAAGCTATATTTAATGTGACTTCTAAGGTAAAAGATACATTGATTTTTAACACATTTGTGCTATGCCAAGTGTTCAATGAATTTAATGCAAGGAAGCTAGAGAAGATGAATGTTTTCAAGGGCATACATCATAACAAGTTATTTCTTAGCATTATTGGTATAACTATTGTACTTCAAGTAGTGATGGTTGAATTCCTTAAGAAATTTGCAGATACTGAGAGATTAAATTGGGGACAGTGGGGTGCATGTATTATAATTGCATCTATTTCTTGGCCTATTAGTTGGATTGTGAAGTTGGTACCTGTTCCACAGAAACCATTACTAAGTTTTCTCAAGATTAAGGGGTAA | 3057 | 0.3994 | MSMSLFRNVKSDDVLLNLSNTISIPCKRWHNAFVAIYCSRALLSHFKSNKYEPNLSLPYSPSYTVVDLSSNHSFLVDQATLTSIVQDKNLESLGRLGGVKRVASALGTNVEQGIKDDNIANDIACRREVFGSNTYPKPASRSFFHFLVEALKDPTILILLACAALSLGFGIKENGIEEGWYDGGSIFIAVFIVIAVSCISNFRQNRQFDKLSQASNDIEFVVVRSGRRRNVSIFDIVVGDVVCLKIGDQVPADGLFVEGHSLQVDESSMTGESENVEVNSNHHPFLFSGTKVVDGYAKMLVTSVGMNTTWGQMMSSISHDTDEQTPLQMRLNRLTSSIGMVGLAVAFLVLIVLLIRYFVGKTTDENGNKMFNGSKTKFDDIVNAVVGMVAAAVTIVVVAIPEGLPLAVTLTLAYSMKKMMADQAMVRKLSACETMGSATIICTDKTGTLTLNQMKVTKFWLGQKSIEEGHYTSIAPYVLGLIREGVALNTTGSVYKSELDSVFDFSGSPTEKAILSWAVLDLNMEMEQLTQNCVMLQVEAFNSKKKMSGVMIRRKVDNTIHAHWKGAAEMVLKMCSRYYDESGILKDLDNTNRLILEQIIQGMAASSLRCIAFAHTSVDANEEHRDDEQNKKVKEEDLTLLGLVGIKDPCRPGVKKAVEACQQAGVNIKMITGDNVFTAKAIATECGILQPNQDTVGAVVEGEEFRNYTPEERLDKVDKICVMARSSPFDKLLMVQCLKQKGHVVAVTGDGTNDAPALKEADIGLSMGIQGTEVAKQSSDIVILDDNFASVATVLRWGRCVYNNIQKFIQFQLTVNVAALAINFVAAVSAGEVPLTAVQLLWVNLIMDTLGALALATEKPTIDLMKNPPIGRTEPLITNIMWRNLLAQALYQITILLTLQFNGEAIFNVTSKVKDTLIFNTFVLCQVFNEFNARKLEKMNVFKGIHHNKLFLSIIGITIVLQVVMVEFLKKFADTERLNWGQWGACIIIASISWPISWIVKLVPVPQKPLLSFLKIKG | 1018 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lal2g1193 | 1018 | Gene3D | - | 439 | 793 | IPR023214 | - | |
Lal2g1193 | 1018 | SFLD | Haloacid Dehalogenase | 424 | 801 | - | - | |
Lal2g1193 | 1018 | TIGRFAM | ATPase-IIB_Ca: calcium-translocating P-type ATPase, PMCA-type | 89 | 1005 | IPR006408 | GO:0005388|GO:0005524|GO:0016020|GO:0070588 | |
Lal2g1193 | 1018 | Pfam | E1-E2 ATPase | 219 | 420 | - | - | |
Lal2g1193 | 1018 | PRINTS | H+-transporting ATPase (proton pump) signature | 596 | 614 | IPR001757 | GO:0005215|GO:0005524|GO:0016021|GO:0016887 | |
Lal2g1193 | 1018 | PRINTS | H+-transporting ATPase (proton pump) signature | 748 | 764 | IPR001757 | GO:0005215|GO:0005524|GO:0016021|GO:0016887 | |
Lal2g1193 | 1018 | PRINTS | H+-transporting ATPase (proton pump) signature | 780 | 805 | IPR001757 | GO:0005215|GO:0005524|GO:0016021|GO:0016887 | |
Lal2g1193 | 1018 | TIGRFAM | ATPase_P-type: HAD ATPase, P-type, family IC | 721 | 829 | IPR001757 | GO:0005215|GO:0005524|GO:0016021|GO:0016887 | |
Lal2g1193 | 1018 | TIGRFAM | ATPase_P-type: HAD ATPase, P-type, family IC | 385 | 466 | IPR001757 | GO:0005215|GO:0005524|GO:0016021|GO:0016887 | |
Lal2g1193 | 1018 | TIGRFAM | ATPase_P-type: HAD ATPase, P-type, family IC | 186 | 357 | IPR001757 | GO:0005215|GO:0005524|GO:0016021|GO:0016887 | |
Lal2g1193 | 1018 | Pfam | haloacid dehalogenase-like hydrolase | 440 | 762 | - | - | |
Lal2g1193 | 1018 | SUPERFAMILY | Metal cation-transporting ATPase, ATP-binding domain N | 449 | 646 | IPR023299 | GO:0000166 | |
Lal2g1193 | 1018 | ProSitePatterns | E1-E2 ATPases phosphorylation site. | 444 | 450 | IPR018303 | - | |
Lal2g1193 | 1018 | PRINTS | P-type cation-transporting ATPase superfamily signature | 265 | 279 | - | - | |
Lal2g1193 | 1018 | PRINTS | P-type cation-transporting ATPase superfamily signature | 442 | 456 | - | - | |
Lal2g1193 | 1018 | PRINTS | P-type cation-transporting ATPase superfamily signature | 642 | 653 | - | - | |
Lal2g1193 | 1018 | PRINTS | P-type cation-transporting ATPase superfamily signature | 664 | 674 | - | - | |
Lal2g1193 | 1018 | PRINTS | P-type cation-transporting ATPase superfamily signature | 748 | 767 | - | - | |
Lal2g1193 | 1018 | PRINTS | P-type cation-transporting ATPase superfamily signature | 772 | 784 | - | - | |
Lal2g1193 | 1018 | PANTHER | CALCIUM-TRANSPORTING ATPASE | 14 | 996 | - | - | |
Lal2g1193 | 1018 | Gene3D | - | 149 | 1002 | - | - | |
Lal2g1193 | 1018 | PANTHER | CATION TRANSPORTING ATPASE | 14 | 996 | - | - | |
Lal2g1193 | 1018 | CDD | P-type_ATPase_Ca_PMCA-like | 126 | 881 | - | - | |
Lal2g1193 | 1018 | Gene3D | - | 122 | 318 | - | - | |
Lal2g1193 | 1018 | SFLD | p-type atpase | 424 | 801 | IPR044492 | - | |
Lal2g1193 | 1018 | SUPERFAMILY | Calcium ATPase, transduction domain A | 218 | 316 | IPR008250 | - | |
Lal2g1193 | 1018 | Gene3D | - | 452 | 649 | IPR023299 | GO:0000166 | |
Lal2g1193 | 1018 | SUPERFAMILY | Calcium ATPase, transmembrane domain M | 97 | 1005 | IPR023298 | - | |
Lal2g1193 | 1018 | SMART | Cation_ATPase_N_a_2 | 92 | 171 | IPR004014 | - | |
Lal2g1193 | 1018 | SUPERFAMILY | HAD-like | 440 | 853 | IPR036412 | - | |
Lal2g1193 | 1018 | Coils | Coil | 519 | 539 | - | - | |
Lal2g1193 | 1018 | Pfam | Cation transporting ATPase, C-terminus | 833 | 1003 | IPR006068 | - | |
Lal2g1193 | 1018 | Pfam | Cation transporter/ATPase, N-terminus | 97 | 166 | IPR004014 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lal2g1193 | Lal-Chr2 | 8963644 | 8966700 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lal2g1193 | 13 | 1017 | Primary Pumps ATPases | AT3G22910 | 68.942 | 0.0 | 1316 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lal2g1193 | K01537 | - | gmx:100793918 | 1531.54 |