Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal2g1190 ATGCCAGTGAGACAGATGAAAGAAAGCTCAGAACAACACCTTGTGATCAAAACCCATTTGCAGAATCATGCTAAGAAGGTTCCTAGAGCTATTCAAAATGGAAAAGGTCCACCACTATTGCCACAACAAGAACCTCCTCATAACCAAACTTCACCACCTAACAGGAACAAAGGAAGAAGAAGGGGTAGAGGGGGTAGGAAATTTGATCAAGGTGATGTTTTGATGAGACCTAGTTGTAGACCTTGCACTGTTGTGGATACAAACACTGCAAATGGATCTGTTGAAAATGGAAACATGAATGGTGGTTGTGACATTGATATGGGGTACCCTACTTCAAGCAAGTCTTTGAGCTTTACTCCTAGGCCTGGATATGGACAAGTTGGGACAAAATGCATTGTGAAGGCTAACCACTTCTTTGCAGAGTTACCAGACAAGGACTTGAACCATTATGATGTCACTATTACACCAGAAGTGTCTTCCAAACCAGTAAACAGGTCCATCATTGCAGAACTTGTGAGGCTTTATAAAGAGTCTGACCTTGGGATGAGGCTTCCTGCATATGATGGCAGAAAAAGTTTGTACACGGCCGGAGCATTTCCGTTTACTTGGAGAGAGTTTAAAATTAAGCTTGTAGACGAAGATGACAGAGTTAATTGCCCCAAAAGAGAAAGAGAATACAAAGTGGTGATTAAGTTTGTCGCTCGGGCAAACTTGCACCACTTAGGCCAGTTTCTAGCCGGTAAGCGTGCTGATGCTCCACAAGAGGCACTCCAAATTCTTGATATTGTACTAAGAGAGCTATCATCTAAGAGGTTTTGCCCCATTGGGAGGTCTTTCTTTTCACCGGATATTAGAACACCACAACGGCTTGGAGAGGGATTGGAGTCTTGGTGTGGATTTTATCAAAGCATAAGGCCTACTCAGATGGGCCTTTCCCTCAATATTGATATGGCTTCTGCTGCGTTCATTGAACCTCTTCCGGTAGTGGATTTTGTTGGACAGTTATTAGGAAAAGATGTGCTGTCAAGGCAATTGTCGGATGCTGATCGCATTAAGATTAAGAAGGCCCTTAGAGGAGTAAAAGTTGAAGTAACACATAGAGGGACATTTAGACGAAAATATCGCGTATCAGGTCTGACATCTCAACCAACAAGGGAACTTGTGTTTCCTGTTGATGAGAACTCAACGATGAAATCGGTAGTTGAATACTTCCAAGAGATGTATGGTTTCACTATTAAATATACTCACCTTCCTTGCCTTCAAGTTGGAAACCAGAAGAAAGCTAACTACTTACCTATGGAGGCCTGCAAAATTGTGGAGGGGCAACGTTACACAAAAAGGTTGAACGAGAAGCAAATTACTGCTCTCTTGAAAGTTACTTGCCAGAGACCTCGTGATCGAGAAAATGACATTTTGCGGACTGTTCAACATAATGCTTATGATCGAGATCCATATGCAAAGGAATTTGGGATCAATATCAGCGAGAAGCTAGCTACTGTCGAAGCACGGATACTTCCTGCCCCTTGGCTTAAATATCATGAAAGCGGCAAAGAAAAGAACTGCTTACCCCAAGTTGGTCAGTGGAATATGATGAACAAGAAAATGATTAATGGAATGACTGTTAGCAATTGGGCATGCATAAATTTTTCACGGAGCGTGCAAGACAGTGTTGCTCACACATTTTGTAACGAGCTTGCCCAAATGTGTCAAGTATCTGGCATGGAATTTAATCCAGAGCCTGTTATCCCGATCTACAATGCCAAGCCGGAGCAAGTAGAGAAAGCTCTGAAACATGTTTGCCACGTGTCAACGAATAAAACCAAAGGAAAGGAATTAGAGCTTTTGTTAGCACTATTGCCGGACAATAACGGCTCTCTCTATGGCGATCTCAAGCGTATTTGTGAAACCGAGCTTGGTATAATTTCTCAATGTTGTCTGACAAAGCATGTCTTTAGGATCACTAAGCAGTACTTAGCTAACGTGTCTCTGAAGATCAATGTTAAGATGGGAGGTAGAAACACCGTTCTTGTTGATGCTGTAAGCTGCAGAATACCATTGGTTAGCGACATACCAACTATAATATTTGGAGCAGATGTTACCCACCCAGAAAATGGAGAAGACTCTAGCCCCTCAATAGCAGCTGTTGTAGCATCCCAGGACTGGCCTGAAGTGACAAAATATGCAGGTTTAGTTTGTGCTCAAACTCAAAGACAGGAACTCATACAAGATCTGTACAAAACTTGGCATGATCCTGTTCGTGGCATAGTAAGTGGTGGCATGATTAGAGATTTGTTGGTTTCCTTTCGAAAGGCAACAGGACAAAAGCCACTAAGGATTATATTTTACAGGGATGGTGTAAGTGAAGGGCAGTTTTACCAAGTTTTACTTTACGAGTTGGACGCGATCCGCAAGGCATGTGCTTCTTTAGAACCGAATTATCAGCCTCCTGTAACTTTCATAATTGTACAAAAAAGACATCATACTCGGTTGTTCGCAAATAACCATAGAGACAGGAACAGTACAGATAAGAGTGGAAATATATTGCCGGGGACTGTTGTGGATACTAAAATCTGTCATCCAACAGAATTTGATTTTTATCTCTGTAGTCATGCCGGCATTCAGGGTACAAGCCGTCCAGCCCATTATCATGTTTTATGGGACGAAAACAACTTTACGGCCGACGGAATTCAATCTTTGACAAACAACCTGTGTTATACATATGCCAGGTGTACACGCTCTGTATCTGTTGTCCCTCCAGCATATTATGCACATTTAGCAGCATTTCGAGCCCGTTTCTATATGGAACCAGACCTGCAGGAGAATGGCTCATCAGGCGGCGGTAGTGCTGCAGGTCATGGTGGTTCAAAGGCAACACGAGCAGCCGGAGATTGCGGTGTGAAGCCATTGCCAGCCTTGAAAGAAAATGTGAAAAGAGTAATGTTTTATTGTTAG 2952 0.4262 MPVRQMKESSEQHLVIKTHLQNHAKKVPRAIQNGKGPPLLPQQEPPHNQTSPPNRNKGRRRGRGGRKFDQGDVLMRPSCRPCTVVDTNTANGSVENGNMNGGCDIDMGYPTSSKSLSFTPRPGYGQVGTKCIVKANHFFAELPDKDLNHYDVTITPEVSSKPVNRSIIAELVRLYKESDLGMRLPAYDGRKSLYTAGAFPFTWREFKIKLVDEDDRVNCPKREREYKVVIKFVARANLHHLGQFLAGKRADAPQEALQILDIVLRELSSKRFCPIGRSFFSPDIRTPQRLGEGLESWCGFYQSIRPTQMGLSLNIDMASAAFIEPLPVVDFVGQLLGKDVLSRQLSDADRIKIKKALRGVKVEVTHRGTFRRKYRVSGLTSQPTRELVFPVDENSTMKSVVEYFQEMYGFTIKYTHLPCLQVGNQKKANYLPMEACKIVEGQRYTKRLNEKQITALLKVTCQRPRDRENDILRTVQHNAYDRDPYAKEFGINISEKLATVEARILPAPWLKYHESGKEKNCLPQVGQWNMMNKKMINGMTVSNWACINFSRSVQDSVAHTFCNELAQMCQVSGMEFNPEPVIPIYNAKPEQVEKALKHVCHVSTNKTKGKELELLLALLPDNNGSLYGDLKRICETELGIISQCCLTKHVFRITKQYLANVSLKINVKMGGRNTVLVDAVSCRIPLVSDIPTIIFGADVTHPENGEDSSPSIAAVVASQDWPEVTKYAGLVCAQTQRQELIQDLYKTWHDPVRGIVSGGMIRDLLVSFRKATGQKPLRIIFYRDGVSEGQFYQVLLYELDAIRKACASLEPNYQPPVTFIIVQKRHHTRLFANNHRDRNSTDKSGNILPGTVVDTKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADGIQSLTNNLCYTYARCTRSVSVVPPAYYAHLAAFRARFYMEPDLQENGSSGGGSAAGHGGSKATRAAGDCGVKPLPALKENVKRVMFYC 983
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal2g1190 983 Pfam PAZ domain 348 456 IPR003100 GO:0005515
Lal2g1190 983 Gene3D - 504 677 - -
Lal2g1190 983 Pfam Argonaute linker 2 domain 466 512 IPR032472 -
Lal2g1190 983 Pfam Mid domain of argonaute 523 599 IPR032473 -
Lal2g1190 983 SUPERFAMILY PAZ domain 320 480 IPR036085 GO:0005515
Lal2g1190 983 Gene3D - 683 983 IPR036397 GO:0003676
Lal2g1190 983 Pfam Argonaute linker 1 domain 274 323 IPR014811 -
Lal2g1190 983 Pfam N-terminal domain of argonaute 130 264 IPR032474 -
Lal2g1190 983 PANTHER PROTEIN ARGONAUTE 10 56 982 - -
Lal2g1190 983 Pfam Piwi domain 615 934 IPR003165 GO:0003676
Lal2g1190 983 SMART PAZ_2_a_3 330 462 IPR003100 GO:0005515
Lal2g1190 983 SMART Piwi_a_2 614 935 IPR003165 GO:0003676
Lal2g1190 983 Gene3D paz domain 319 444 - -
Lal2g1190 983 MobiDBLite consensus disorder prediction 30 73 - -
Lal2g1190 983 ProSiteProfiles PAZ domain profile. 326 440 IPR003100 GO:0005515
Lal2g1190 983 SUPERFAMILY Ribonuclease H-like 606 936 IPR012337 -
Lal2g1190 983 CDD Piwi_ago-like 484 934 IPR045246 -
Lal2g1190 983 ProSiteProfiles Piwi domain profile. 614 935 IPR003165 GO:0003676
Lal2g1190 983 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 56 982 - -
Lal2g1190 983 SMART DUF1785_2 273 325 IPR014811 -
Lal2g1190 983 CDD PAZ_argonaute_like 325 439 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal2g1190 Lal-Chr2 8909217 8917971 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal2g1190 1 983 Eukaryotic Initiation Factors Gene Family AT5G43810 81.200 0.0 1641
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal2g1190 K11593 - gmx:100816999 1758.04