LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lal2g1179	ATGTCTTCTTTTTATTCTAGCCTAAGGGGTGATGTGTTAAATTATGCACAATACCCTAACAACACAAATCAAATTGCATGCAGATTATGCAAACAAGTTTTCACAACCACTCAAGCTCTAATAGCCCATATTGAATCCCATATGAAAAATGAAGAGGTTGCAATGAGAAGTATCTATTCACCAAACTATATGAACTCTCAGAGAAACCTAGTTTCTCCATTTCTCCCACCAACTTTTCCTATGACAAGGCAACTACAAGAAACCAGAAAATTTTCTGATATTAGTAACAGTTTCCAAGCATCATCACAATCTGCAGCAACTCATCTTCTAAGAAGAAACTCTTTTTTTAGTGGTAGCCAGGTTGGTGCTTTAACCCTAAATAGGGAAATGAAACTTTCATCACCTTCAGTTCTTTCAGGTACAGGGAATAATGCTATGGACATAGCAAATTTGTCAATTCTACAAACCCGCAAAAGAAAGCTAGCAGATTTATCTCCAGTTGATGGTACTAGAGAATTTATAGTGCAGTTAGAGAAACCCTTGAAGAAGATTGATTTCATTGATTTGGTGAACATAGATGATGACAACTCTGATGTGAAACCATTGAATTTAGCTCTTAAGCTTTAG	627	0.3589	MSSFYSSLRGDVLNYAQYPNNTNQIACRLCKQVFTTTQALIAHIESHMKNEEVAMRSIYSPNYMNSQRNLVSPFLPPTFPMTRQLQETRKFSDISNSFQASSQSAATHLLRRNSFFSGSQVGALTLNREMKLSSPSVLSGTGNNAMDIANLSILQTRKRKLADLSPVDGTREFIVQLEKPLKKIDFIDLVNIDDDNSDVKPLNLALKL	208

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lal2g1179	208	ProSitePatterns	Zinc finger C2H2 type domain signature.	27	47	IPR013087	-
	Lal2g1179	208	ProSiteProfiles	Zinc finger C2H2 type domain profile.	25	52	IPR013087	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lal2g1179	Lal-Chr2	8679020	8679646	Wgd

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	C2H2	Lal2g1179		None	None	None

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lal2g1179	-		K20210	lja:Lj2g3v1643270.1	141.739