Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal2g1164 ATGGATCATGTAATTAATGGAAAGTTCAAGCTTGGGAGGAAGATTGGGAGTGGATCTTTTGGGGAGCTTTATTTGGGTGTTAATGTTCAAAGTGGAGAAGAGGTGGCTGTTAAGCTGGAACCTGTGAAAACAAAGCATCCTCAACTTCACTATGAGTCAAAATTGTATATGCTTCTTCAAGGAGGAACTGGCATACCTCATTTGAAATGGTTTGGAGTTGAGGGTGACTACAATGTCATGGTCATTGACCTTCTTGGTCCAAGTCTCGAAGACTTGTTCAACTATTGCAGTAGGAAGTTCTCTCTGAAAACGGTTCTGATGCTTGCGGATCAAATGATAAACAGAGTTGAGTACATGCACTCACGGGGACTTCTGCATCGTGATATAAAGCCTGATAACTTTTTAATGGGTTTAGGCCGCAAGGCAAATCAGGTATACATAATTGATTATGGCCTTGCAAAAAAGTATCGCGACCTTCAAACACATAAACATATACCATACAGGGAAAACAAGAATCTCACTGGAACTGCTCGGTATGCTAGTGTTAACACTCACCTTGGAATTGAACAAAGCAGAAGAGATGATCTTGAATCGCTTGGTTATGTCTTCTTGTACTTTTTGAGAGGAAGTCTCCCTTGGCAAGGTTTGAAAGCTGGCACTAAAAAGCAAAAGTATGAAAAGATAAGTGAAAAGAAGATGCTTACTCCAATAGAGGTCTTATGCAAGTCACATCCATCAGAGTTCACATCATACTTCCACTATTGTCGTTCATTGCGGTTTGAAGATAAACCTGATTATTCGTATCTTAAGAGTCTGTTCCGGGATCTATTCATTAGAGAAGGTTATCAGTTTGACTATGTATTTGATTGGACTATATTGAAATATCCACAAATTGGATCCAGTTCTAGAGCTCAACCAAGTGGGAAACCTGTCTTAAACCCAGGACCATCTCGGGAGAGATTAGAACGGCTTTCAGTTGGAAAAGAGATTCGGGATAGAATATCAGGTGCAGTCAAGGTATTTTCGAGAAGGAATAGCTCTGTGCGTGGTCCAAGTACCGATCGTTCTAGGCATAGGGCTTCAGATGATGTGCCATCTTCCAAAGATGTGCAACCTGATATTGAGAGAGCTTGTAGTTCTTCTCGGAATGGCAGTGCATTAAAAAGGCCCGTCATTTCAAGCAGCCGACCAAGTTCCTCTGGTGAGCCTAGTGAAAACCATTCGAGCCGATTGGTCTCAAGCAGTGGTCGCATATCTACTACTCGGAGGATTCAACCAAGTTTCGAGTCCAAATCATCTTTCACCCGCACTCCAGGGACACATGGTGGCCGCGATGATGCACTCAGGAGTTTTGAGCTCTTGTCAATTGCTTCCGGGAAAAAGAAATGA 1389 0.4233 MDHVINGKFKLGRKIGSGSFGELYLGVNVQSGEEVAVKLEPVKTKHPQLHYESKLYMLLQGGTGIPHLKWFGVEGDYNVMVIDLLGPSLEDLFNYCSRKFSLKTVLMLADQMINRVEYMHSRGLLHRDIKPDNFLMGLGRKANQVYIIDYGLAKKYRDLQTHKHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVFLYFLRGSLPWQGLKAGTKKQKYEKISEKKMLTPIEVLCKSHPSEFTSYFHYCRSLRFEDKPDYSYLKSLFRDLFIREGYQFDYVFDWTILKYPQIGSSSRAQPSGKPVLNPGPSRERLERLSVGKEIRDRISGAVKVFSRRNSSVRGPSTDRSRHRASDDVPSSKDVQPDIERACSSSRNGSALKRPVISSSRPSSSGEPSENHSSRLVSSSGRISTTRRIQPSFESKSSFTRTPGTHGGRDDALRSFELLSIASGKKK 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal2g1164 462 ProSitePatterns Protein kinases ATP-binding region signature. 15 38 IPR017441 GO:0005524
Lal2g1164 462 Pfam Protein kinase domain 10 227 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal2g1164 462 ProSitePatterns Serine/Threonine protein kinases active-site signature. 124 136 IPR008271 GO:0004672|GO:0006468
Lal2g1164 462 MobiDBLite consensus disorder prediction 373 439 - -
Lal2g1164 462 MobiDBLite consensus disorder prediction 341 447 - -
Lal2g1164 462 PANTHER CASEIN KINASE I-LIKE PROTEIN 1 449 - -
Lal2g1164 462 ProSiteProfiles Protein kinase domain profile. 9 278 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal2g1164 462 Gene3D Transferase(Phosphotransferase) domain 1 1 322 - -
Lal2g1164 462 MobiDBLite consensus disorder prediction 300 326 - -
Lal2g1164 462 SMART serkin_6 9 435 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal2g1164 462 SUPERFAMILY Protein kinase-like (PK-like) 4 290 IPR011009 -
Lal2g1164 462 MobiDBLite consensus disorder prediction 350 370 - -
Lal2g1164 462 PANTHER CASEIN KINASE-RELATED 1 449 - -
Lal2g1164 462 CDD STKc_CK1_delta_epsilon 8 282 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal2g1164 Lal-Chr2 8504636 8512114 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal2g1164 8 213 MAP Kinase Kinase Kinase AT3G06030 25.463 2.78e-14 73.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1 Lal2g1164 Pkinase 1.2e-25 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal2g1164 K08960 - jre:108991207 806.594