Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal2g1163 ATGGAAGGTACAAGGCGCTGGTTTAGCAAGTTCAAGCCAAAGGACAAAACGAAGTCTGCAAATGGCAAGGAAACTAATGGTACAACAAAAGAAGGATCCAAAACTCCAACAAACGATGAAGCACCTTCAAATGTAACAAAACAGAAAGTTGAAGCTGCAAAGCAGTACATAGAAAACCATTATAAGAAACAGATGCAGAGCCTTCAGGAGCGGAAGGAAAGACGTAATATGCTAGAAAAAAAGTTGGCTGATGCTGAAGTCTCTGTGGAAGAGCAGAACAACTTGCTTAAGTATTTGGAGAAAAAGGAGACAGAATACATGCGCCTAATGAGACACAAGATGGGGGCTGATGATTTCGAACCCCTCACTATGATTGGGAAGGGTGCATTTGGTGAGGTTAGAATATGCCGGGAGAAGGCAAATGGTCATGTATATGCTATGAAGAAACTTAAGAAATCAGAGATGCTTCGCAGAGGCCAAGTTGAACATGTAAAAGCTGAGAGGAACCTACTTGCTGAAGTTGACAGCAATTGCATTGTAAAACTTTATTGTTCCTTTCAAGATGAAGAGTATTTATATCTCATCATGGAGTATCTACCTGGTGGAGATATGATGACGTTGCTGATGCGGAAGGATGTACTAACAGAAGATGAGGCTAGGTTCTATGTTGGGGAGACTGTTCTAGCCATAGAGTCGATTCATAAGCACAATTATATTCATAGAGATATCAAGCCTGACAACTTGCTGTTAGATAGACATGGTCACATGAAATTATCAGATTTTGGGTTATGCAAACCGCTAGACTGCAGTACTCTTCAGGAAAAAGACTTCTCTACTGGAACTAACAGAAGTGGAGCCCTTCGGAGTGATGGACGTCCAGTGGCTCCTACACGAACGCAACAAGAACAGCTGCAACATTGGCAGAAAAATAGGCGAATGCTTGCCTATTCTACGGTTGGAACACCTGATTATATTGCACCTGAAGTTCTACTGAAGAAAGGATATGGCGTAGAATGTGATTGGTGGTCTCTGGGAGCTATAATGTATGAAATGCTTGTAGGTTTTCCACCATTTTATTCAGATGAACCAATGTCAACTTGTAAAAAGATAGTAAATTGGAAAACATACTTAAAATTTCCAGAAGAAGCTAAACTATCAGCAGAGGCAAAGGATCTTATTTGTAGACTCCTATGTAATGTAGAGCAGAGGCTTGGAACTAAAGGAGCTCATGAAATAAAGGCTCACCCATGGTTCAAAGGTATTGAATGGGATAAATTGTACCAAATGAAGGCTGCTTTTATTCCCGAGGTCAATGATGAATTAGATACCCAAAATTTTGAGAAGTTTGATGAGGTGGACAAGAAAACTGAACCATCCTCAAAGGCAGGCCCGTGGAAAAAGGTGAATTCTCAATCAAGACCTCCATCAATGGTTCCTTCATCATTCTATGCACCTAGGACAGATTTTCAAGCACCTGGTTCTAATTTCAATGGCTTTGGTAATTCTGGTGGTTATCGTGGTAGAAACAGTAGTCGTCGTGGTCGTCAGAGAGGAGGAAGACATCGGTGTTTTAAATTTTACTTCGAAGCCGCAATATTGCGGGTTTGGGAGTCTCCTTCTCAGCCGCATTTTCCCGCATTTGTGATGCTGCCATCTAAGGATGTTAACTTTGTTGGGTACACATACAAGAATTTTGAAATTTTGAATGATCATGAAATACATGGAATCGCTGAATTGAAGAAAAAGAGCACGAAACCTAAAAGGCCATCTATCAAGGCCCTATTTGATGATGAATCAGCTATGGCTTCCAATCAACCAGTCAAAGGGAGCTTCATAAGCCTCTTACCTCCTCAAATAGAAGTTCATGAGAAGAGTGAATCACACTGA 1887 0.4091 MEGTRRWFSKFKPKDKTKSANGKETNGTTKEGSKTPTNDEAPSNVTKQKVEAAKQYIENHYKKQMQSLQERKERRNMLEKKLADAEVSVEEQNNLLKYLEKKETEYMRLMRHKMGADDFEPLTMIGKGAFGEVRICREKANGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNCIVKLYCSFQDEEYLYLIMEYLPGGDMMTLLMRKDVLTEDEARFYVGETVLAIESIHKHNYIHRDIKPDNLLLDRHGHMKLSDFGLCKPLDCSTLQEKDFSTGTNRSGALRSDGRPVAPTRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGVECDWWSLGAIMYEMLVGFPPFYSDEPMSTCKKIVNWKTYLKFPEEAKLSAEAKDLICRLLCNVEQRLGTKGAHEIKAHPWFKGIEWDKLYQMKAAFIPEVNDELDTQNFEKFDEVDKKTEPSSKAGPWKKVNSQSRPPSMVPSSFYAPRTDFQAPGSNFNGFGNSGGYRGRNSSRRGRQRGGRHRCFKFYFEAAILRVWESPSQPHFPAFVMLPSKDVNFVGYTYKNFEILNDHEIHGIAELKKKSTKPKRPSIKALFDDESAMASNQPVKGSFISLLPPQIEVHEKSESH 628
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal2g1163 628 CDD STKc_NDR_like 117 470 - -
Lal2g1163 628 MobiDBLite consensus disorder prediction 22 49 - -
Lal2g1163 628 MobiDBLite consensus disorder prediction 463 478 - -
Lal2g1163 628 PANTHER SERINE/THREONINE-PROTEIN KINASE 21 470 - -
Lal2g1163 628 PANTHER SERINE/THREONINE-PROTEIN KINASE 549 602 - -
Lal2g1163 628 Coils Coil 61 102 - -
Lal2g1163 628 MobiDBLite consensus disorder prediction 493 517 - -
Lal2g1163 628 ProSiteProfiles Protein kinase domain profile. 119 418 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal2g1163 628 SMART serkin_6 119 418 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal2g1163 628 Pfam Protein kinase domain 121 418 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal2g1163 628 ProSiteProfiles AGC-kinase C-terminal domain profile. 419 572 IPR000961 GO:0004674|GO:0005524|GO:0006468
Lal2g1163 628 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 549 602 - -
Lal2g1163 628 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 21 470 - -
Lal2g1163 628 MobiDBLite consensus disorder prediction 451 481 - -
Lal2g1163 628 ProSitePatterns Protein kinases ATP-binding region signature. 125 148 IPR017441 GO:0005524
Lal2g1163 628 SUPERFAMILY Protein kinase-like (PK-like) 93 465 IPR011009 -
Lal2g1163 628 Gene3D Transferase(Phosphotransferase) domain 1 203 281 - -
Lal2g1163 628 Gene3D Transferase(Phosphotransferase) domain 1 317 436 - -
Lal2g1163 628 SMART pkinase_C_6 419 469 IPR000961 GO:0004674|GO:0005524|GO:0006468
Lal2g1163 628 ProSitePatterns Serine/Threonine protein kinases active-site signature. 238 250 IPR008271 GO:0004672|GO:0006468
Lal2g1163 628 MobiDBLite consensus disorder prediction 1 21 - -
Lal2g1163 628 Gene3D Phosphorylase Kinase; domain 1 437 447 - -
Lal2g1163 628 Gene3D Phosphorylase Kinase; domain 1 117 202 - -
Lal2g1163 628 MobiDBLite consensus disorder prediction 493 509 - -
Lal2g1163 628 MobiDBLite consensus disorder prediction 1 49 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal2g1163 Lal-Chr2 8489569 8503281 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal2g1163 549 626 AGC Kinase Gene Family AT3G23310 69.231 1.58e-24 106
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_NDR Lal2g1163 Pkinase 2.6e-64 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal2g1163 K08790 - gmx:100795087 883.634
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g1882 1 21114044 21119653 Lal2g1163 2 8489569 8503281 PCT