Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal2g1157 ATGGTGAGAGCTCCTTGTTGTGAAAAACTTGGATTGAAAAAGGGTCTATGGACCCATGAAGAAGATCAAATCCTCATATCTTACATCCAAAAACATGGTCATACCAATTGGCGTTCCCTCCCGAAAGAAGCAGGCTTGTTAAGGTGTGGAAAGAGCTGCAGATTACGGTGGATTAACTATTTAAGGCCAGGCATTAAGAGAGGAAATTTCACAAATGATGAAGAGGAAACTATCATTAAGATGCATGAAAAGCTGGGGAATAGGTGGTCAACAATAGCAGCAAAATTACCGGGAAGAACCGACAATGAAATAAAAAATGTATGGTACACCATATTGAAAAAGAGGTTACTGAAACCCAACCAACCTAATTCAAATACTAGAAGAGTTTCAAAACCAAAAATCAAAAGATCTGATTCCAATTCTAGCACACTAACACAATCAGAACAAGACACTAGTCTTAATTTCCATGAAATGAAGGCTACACCACTATGCACTTATTTCAGTGATTTTTCATCAGTCACTGTTAGTAATGAAGGAAAAAATATGGACATAGAGTCTTTTGAGATAATGCCAGAAATTGATGAAAGATTTTGGTCAGAGGAAGCAATTAATTCAGAAGAATCTTTGCAAGAGAATTATGGTTATGGTTCAAACTTTGAAGATGGGATGGATTTTTGGTATGATGTGTTCATTAGAGCTGGGGAATCAAATGAATTGCCAAACATATCTTAG 732 0.3648 MVRAPCCEKLGLKKGLWTHEEDQILISYIQKHGHTNWRSLPKEAGLLRCGKSCRLRWINYLRPGIKRGNFTNDEEETIIKMHEKLGNRWSTIAAKLPGRTDNEIKNVWYTILKKRLLKPNQPNSNTRRVSKPKIKRSDSNSSTLTQSEQDTSLNFHEMKATPLCTYFSDFSSVTVSNEGKNMDIESFEIMPEIDERFWSEEAINSEESLQENYGYGSNFEDGMDFWYDVFIRAGESNELPNIS 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal2g1157 243 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Lal2g1157 243 PANTHER TRANSCRIPTION FACTOR MYB30-LIKE 1 236 - -
Lal2g1157 243 CDD SANT 69 112 IPR001005 -
Lal2g1157 243 SMART sant 13 63 IPR001005 -
Lal2g1157 243 SMART sant 66 114 IPR001005 -
Lal2g1157 243 CDD SANT 17 61 IPR001005 -
Lal2g1157 243 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Lal2g1157 243 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Lal2g1157 243 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Lal2g1157 243 Gene3D - 14 66 - -
Lal2g1157 243 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Lal2g1157 243 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 236 - -
Lal2g1157 243 MobiDBLite consensus disorder prediction 136 151 - -
Lal2g1157 243 Pfam Myb-like DNA-binding domain 67 112 IPR001005 -
Lal2g1157 243 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Lal2g1157 243 Gene3D - 68 156 - -
Lal2g1157 243 MobiDBLite consensus disorder prediction 119 151 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal2g1157 Lal-Chr2 8371285 8374042 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal2g1157 1 240 MYB Transcription Factor Family AT2G31180 48.659 1.34e-74 225
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lal2g1157 Myb_DNA-binding 3.7e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal2g1157 K09422 - gmx:100807569 329.717