Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal2g1143 ATGAACAAACGCCACCACATGGACCTTTCCATCAATGAAAGCAGCAGCAGAAGCGGCGGCGGAGGTAGAGATGAAGATGAAGAAAAGGACAACGGTGATGAGCCAAAGGAGGGTGCAGTTGATATTGGAAACCGAAGACCAAGAGGAAGACCACCTGGATCAAAGAACAAACCCAAACCACCAATCTTTGTGACTAGGGATAGCCCAAATACTCTTAGAAGTCATGTGTTGGAAATTGCTGGTGGAGCTGATGTAGCAGAAAGTGTTGCACAATTTGCAAGAAGGCGTCAACGTGGTGTATGTGTTCTTAGTGGGAGTGGGTCTGTGGCAAACGTTACTCTTAGGCAACCAGCTGCACCAGGAGCAGTTGTAGCACTTCATGGAAGATTTGATATTTTGTCCTTAACTGGTGCATTCTTGCCTGGTCCTGCTCCTCCTGGAGCCACAGGGCTTACAGTGTACCTTGCTGGAGGGCAAGGACAGGTTGTTGGAGGGAGTGTTGTTGGGTCTTTAGTAGCTGCTGGACCAGTCATGTTGATTGCTGCAACTTTTGCTAATGCAACCTATGAGAAATTGCCCCTTGAGGATGATGATGAGGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTAATAGTGCTGTGCAAGGTGGAGGTAGAGGTGTTGGTGGGTCTCCTCCTGGGATTGGTAACAGTGGTGGGGCTCATCAATTGCAGGGTGGAATTCCAGATCCATCTTCTCTTCCTTTGTATAATCTGACATCAAATCTGATTCCTAATGGAAGCCAAGTGGGACATGAAGCTTTTGCTTGGGCTCATGGAAGGCCACCTTATTGA 831 0.4862 MNKRHHMDLSINESSSRSGGGGRDEDEEKDNGDEPKEGAVDIGNRRPRGRPPGSKNKPKPPIFVTRDSPNTLRSHVLEIAGGADVAESVAQFARRRQRGVCVLSGSGSVANVTLRQPAAPGAVVALHGRFDILSLTGAFLPGPAPPGATGLTVYLAGGQGQVVGGSVVGSLVAAGPVMLIAATFANATYEKLPLEDDDEGGGGGGGGGGNSAVQGGGRGVGGSPPGIGNSGGAHQLQGGIPDPSSLPLYNLTSNLIPNGSQVGHEAFAWAHGRPPY 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal2g1143 276 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 20 9 276 - -
Lal2g1143 276 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 9 276 IPR014476 GO:0003680
Lal2g1143 276 Pfam Plants and Prokaryotes Conserved (PCC) domain 73 185 IPR005175 -
Lal2g1143 276 Gene3D - 72 199 - -
Lal2g1143 276 MobiDBLite consensus disorder prediction 1 69 - -
Lal2g1143 276 CDD DUF296 73 156 IPR005175 -
Lal2g1143 276 PIRSF ESCAROLA 1 276 IPR014476 GO:0003680
Lal2g1143 276 SUPERFAMILY AF0104/ALDC/Ptd012-like 70 196 - -
Lal2g1143 276 MobiDBLite consensus disorder prediction 195 241 - -
Lal2g1143 276 ProSiteProfiles PPC domain profile profile. 69 207 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal2g1143 Lal-Chr2 8237254 8238084 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal2g1143 35 276 AT-hook Motif Nuclear Localized (AHL) Family AT4G14465 66.122 4.82e-97 285
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal2g1143 - - gmx:102663643 339.732