Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal2g1142 ATGTCGAAATCAGTAGCATTTGGACTTTTGATTTTCTCGTTTATCGTATGTGTATCTGCAACTGATAACGGACTCCCTAGATGTAATTGTGATGATGAGGCCAGCTGGTGGAGTATTGAGACCATTCTGGAGTGCCAGAGAGTTGGCGATTTTCTGATTGCTGTCGCGTACTTCTCCATTCCGGTGGAGCTGCTATATTTTTTGAGTTGTTCGAATGTTCCGTTCAAATGGGTCCTATTTCTGTTCATTCCTTTCATTGTACTATGTGGGATGACACATTTGCTGAATGGATGGACTTATGGCCCTCACAGTTTCCAACTTATGTTGGCACTCACTGTCTTCAAAATCCTCACTGCCTTGGTATCTTGCGCCACAGCTATAACTCTCGTCACTCTAATCCCTTTGCTTCTTAAGGTGAAGGTTAGAGAATTCATGCTGAAGAAAAAGACTAGGGATCTTGGGAGGGAGGTTGGTCTTATAATGAAACAAAAGGAGGCTGCAATGCATGTAAGAATGCTTACTCAAGAGATTCGCAAGTCACTTGATCGGCATACAATTCTGTACACCACCTTGGTGGAGCTGTCTAAAACCCTTGGTTTGCAAAATTGTGCAGTGTGGATGCCTAATGTTGATAAGACGGAGATGAATCTCACTCATGAATTGAATGAGAGGAACATTAATTCTTCTATACCCATTACTGATCTAGATGTTGTAAGAACTAAGGGAAATGATGGCGTAAACATAATTAACTCTGACTCGGCACTTGCTGCGGCTAGCAGTGGAGTTTATGGTGAGGCAGGACCAGTTGCTGCCATCCGAATGCCAATGCTCCGGGTTTGCAATTTCAAAGGTGGAACGCCTGAGCTAACGCAGGCATGTTATGCAATATTGATTTTGATTCTTCCCAGCGACGAGCCTAGATCTTGGAGCAATCAAGAACTGGAGATTATTAAGGTAGTTGCTGATCAGGTGGCTGTGGCTCTATCTCATGCTGCAATTCTTGAAGAGTCCCAACTTATGAGAGAGAAATTGGAGGAGCAAAATCGAGCTTTACAACAGGCAAAGATGAATGCTTTGAAGGCAAGCCAGGCTAGAGCTTCATTCCAGAAGGTCATGAGTGATGGAATGAGAAAGCCAATGCACACAATTCTTAGTTTGCTTTCAATAATACAAGCTGGGAATATGAATAGTGAACAGAAACTTATTGTGGATTCAATGCTAAGGACCAGCAATGTCCTATCAAACTTGGTAAATGATGCCATGGACAACTCAAGGGATGGTGGAAGATTTCCTATGGAGATCAGGACTTTTGGGTTACATGGCATGATAAAAGAAGCAGCTTGCCTTGCCAAATGCATGTGTGTGTATAGGGGCTTCGATTTCATGGTTGAGGTTGATAAGTCTTTGCCTAACAATGTCATGGGTGATGAACTGAGGGTTTTTCAAGTGATTTTGCATATGGTTGGGAACCTATTAGACGGCAATCATAGGGGACAGATTCTTCTATTTCGGGTTTTTGCAGAAACCGGAAGTCAAGGAAGGAATGATCATGGTTGGACAACATGGAGACCAAGCTCATCTAGTGGAGATGTATATATTAGATTTGAGATGGGGATCAATAGTAGTGATTATCGATTCGAGAGTTCGCTTTCTATAAGGCAGCTCGGGGGTAGGAAGTATACAAGCAATAGGATTGAGGGCAGACTGAGCTTCAACATTTGTAAGAGGATAGTCCAGATGATGCAAGGGAACATATGGTTAGTACCGAATACTCATGGTTTTCCTCAAATGATGGCCCTTCTTCGGTTTCAATTACGCAGATCCATTGCGATATCCATTCCAGAACCCGGAGATAGTTCAGAATCTTCCAATTCAAATTCTCTCTTCAGAGGTCTGCAAGTCTTGTTGGCTGAAAGTGATGCTGTAAATAGAGCAGTGACTCAAAAAATACTTCAGAAACTAGGTTGTGTCGTAATTTCAGTTTCTTCAGGATTTGAATGCCTCACTGCTATACCAGTTGCATCTTCTATTCAAGTCATTCTCTTGGATCTTCACATGCCTGAATTAGACGGGTTTGAAGTTGCCTCGAGAATAAGGAAGTTTAGAAGCCGAGATTGGCCCGTGATCATTGCCATGACTGCAAGCACCGAAGACGATTTGTGGGAAAGATGCATGAAGTTAGGCTTTAATGGAGTTCTCCAAAAGCCAATTCTGTTGCAAGGAATTGCCGGTGAACTCCGAAGAATCATCGGGGAGAGAAGTTAA 2265 0.4269 MSKSVAFGLLIFSFIVCVSATDNGLPRCNCDDEASWWSIETILECQRVGDFLIAVAYFSIPVELLYFLSCSNVPFKWVLFLFIPFIVLCGMTHLLNGWTYGPHSFQLMLALTVFKILTALVSCATAITLVTLIPLLLKVKVREFMLKKKTRDLGREVGLIMKQKEAAMHVRMLTQEIRKSLDRHTILYTTLVELSKTLGLQNCAVWMPNVDKTEMNLTHELNERNINSSIPITDLDVVRTKGNDGVNIINSDSALAAASSGVYGEAGPVAAIRMPMLRVCNFKGGTPELTQACYAILILILPSDEPRSWSNQELEIIKVVADQVAVALSHAAILEESQLMREKLEEQNRALQQAKMNALKASQARASFQKVMSDGMRKPMHTILSLLSIIQAGNMNSEQKLIVDSMLRTSNVLSNLVNDAMDNSRDGGRFPMEIRTFGLHGMIKEAACLAKCMCVYRGFDFMVEVDKSLPNNVMGDELRVFQVILHMVGNLLDGNHRGQILLFRVFAETGSQGRNDHGWTTWRPSSSSGDVYIRFEMGINSSDYRFESSLSIRQLGGRKYTSNRIEGRLSFNICKRIVQMMQGNIWLVPNTHGFPQMMALLRFQLRRSIAISIPEPGDSSESSNSNSLFRGLQVLLAESDAVNRAVTQKILQKLGCVVISVSSGFECLTAIPVASSIQVILLDLHMPELDGFEVASRIRKFRSRDWPVIIAMTASTEDDLWERCMKLGFNGVLQKPILLQGIAGELRRIIGERS 754
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal2g1142 754 SMART gaf_1 182 338 IPR003018 GO:0005515
Lal2g1142 754 CDD HATPase_ETR2_ERS2-EIN4-like 469 601 - -
Lal2g1142 754 ProSiteProfiles Response regulatory domain profile. 633 750 IPR001789 GO:0000160
Lal2g1142 754 SUPERFAMILY GAF domain-like 185 331 - -
Lal2g1142 754 Gene3D - 632 754 - -
Lal2g1142 754 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 428 589 IPR036890 -
Lal2g1142 754 SUPERFAMILY Homodimeric domain of signal transducing histidine kinase 349 425 IPR036097 GO:0000155|GO:0007165
Lal2g1142 754 SUPERFAMILY CheY-like 629 750 IPR011006 -
Lal2g1142 754 SMART HisKA_10 364 429 IPR003661 GO:0000155|GO:0007165
Lal2g1142 754 Gene3D - 427 595 IPR036890 -
Lal2g1142 754 PIRSF Ethylen_sen_hybr_HK 1 754 IPR014525 GO:0004672|GO:0005789|GO:0009723|GO:0038199|GO:0051740
Lal2g1142 754 CDD REC_ETR-like 632 746 - -
Lal2g1142 754 Gene3D - 166 328 IPR029016 -
Lal2g1142 754 Gene3D - 329 426 - -
Lal2g1142 754 Coils Coil 334 364 - -
Lal2g1142 754 Pfam Response regulator receiver domain 634 738 IPR001789 GO:0000160
Lal2g1142 754 CDD HisKA 362 425 IPR003661 GO:0000155|GO:0007165
Lal2g1142 754 PANTHER TWO-COMPONENT SENSOR HISTIDINE KINASE 12 750 - -
Lal2g1142 754 PANTHER ETHYLENE RESPONSE SENSOR 2 12 750 - -
Lal2g1142 754 Pfam GAF domain 182 328 IPR003018 GO:0005515
Lal2g1142 754 SMART REC_2 632 750 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal2g1142 Lal-Chr2 8209433 8214108 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal2g1142 22 750 Miscellaneous Gene Families AT3G04580 57.470 0.0 800
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Lal2g1142 GAF 4.9e-13 CL0161
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal2g1142 K14509 - gmx:100787425 1185.63