Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal2g1124 ATGTCAGGCTGCATGCTGAAGGCAGATGGAACTCTGTTGCTAGGCTTGCAGTTCCAACTTTGCTACCCTTGTACAGGATTGAAAAGAAATGGCAAGAGTTGCAGATTGAGATGGGTGAATTATTTGAGACCAGACCTTAAGAGGGGTCACATAACACCACAAGAAGAGAGCATAATTGTAGAATTGCACAATAGATGGGGAAACAGGTGGTCAATAATCGCAAGAAGCTTGCCAGGAAGAACCGACAATGAGATAAAGAATTATTGGAGGACCCATCTCAAGAAAAAAGTAAAAAGACCCTTTCACCAACAGCAACAACAACAGTTACAACAACATCAGCAAGTGCAACAACAATAA 357 0.4174 MSGCMLKADGTLLLGLQFQLCYPCTGLKRNGKSCRLRWVNYLRPDLKRGHITPQEESIIVELHNRWGNRWSIIARSLPGRTDNEIKNYWRTHLKKKVKRPFHQQQQQQLQQHQQVQQQ 118
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal2g1124 118 MobiDBLite consensus disorder prediction 99 118 - -
Lal2g1124 118 Gene3D - 12 47 - -
Lal2g1124 118 PANTHER MYB-LIKE DNA-BINDING DOMAIN PROTEIN 25 117 - -
Lal2g1124 118 MobiDBLite consensus disorder prediction 102 118 - -
Lal2g1124 118 ProSiteProfiles Myb-like domain profile. 43 93 IPR001005 -
Lal2g1124 118 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 43 97 IPR017930 -
Lal2g1124 118 Pfam Myb-like DNA-binding domain 48 93 IPR001005 -
Lal2g1124 118 PANTHER MYB TRANSCRIPTION FACTOR-RELATED-RELATED 25 117 IPR044676 GO:0003700|GO:0006355|GO:0043565
Lal2g1124 118 SMART sant 47 95 IPR001005 -
Lal2g1124 118 CDD SANT 52 93 IPR001005 -
Lal2g1124 118 SUPERFAMILY Homeodomain-like 28 99 IPR009057 -
Lal2g1124 118 Gene3D - 52 118 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal2g1124 Lal-Chr2 8077019 8078730 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal2g1124 25 108 MYB Transcription Factor Family AT3G24310 77.381 1.66e-44 144
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Lal2g1124 Myb_DNA-binding 9.5e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal2g1124 K09422 - gmx:100813935 150.984