Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal2g1123 ATGTCCCTTCCAGTTTGCTCGCCGGAGCAACTAGCTCAGTTCCTGGGCCCCAACACAACAAACGCAGCCGCCGCCGCCAACTTCATCTGCAACCAATTCACCGCCGTCAATAACACCTTCATTGACACCACCTACGCTGTGGATAACACATACCTCTTGTTCTCTGCCTATCTTGTTTTCTCCATGCAGCTCGGCTTCGCTATGCTCTGCGCCGGCTCCGTCCGCGCCAAGAACACCATGAACATCATGCTCACCAACGTTCTTGACGCCGCCGCCGGTGGCTTGTTTTACTATCTCTTTGGTTTTGCCTTTGCCTTTGGAACCCCATCCAACGGCTTCATCGGCCGCCACTTCTTCGGCCTCAAGGATGTTCCAGATATAACATTTGATTACAGCTATTTTCTCTATCAGTGGGCCTTTGCCATCGCCGCCGCCGGCATAACCAGTGGCTCTATTGCCGAGAGGACTCAGTTTGTGGCTTATCTCATATATTCATCCTTCCTCACCGGCTTTGTTTACCCTGTGGTATCCCACTGGTTTTGGTCTGTTGACGGCTGGGCCAGCCCCACCAATACCGGCAACCTTCTTTTTGGCACCGGTGTCATTGACTTTGCTGGCTCAGGCGTTGTCCACATGGTGGGTGGCATTGCCGGCCTCTGGGGCGCTCTAATCGAGGGCCCCAGGATAGGCCGATTCGACCATACTGGTCGAGCCATCACACTACGTGGACATAGTGCTTCGCTAGTTGTGCTTGGCACTTTTATGCTTTGGTTCGGTTGGTATGGATTCAACCCCGGCTCATTTACCAAGATTTCAAGTGCTTACGAATCTGGTAATTATTATGGTCAATGGAGCGCCGTTGGTAGGACAGCTGTCACAACTACACTAGCAGGTTGTACAGCAGCCCTAACAACTCTTTTTGGGAAAAGAATTCTCTCTGGTCATTGGAATGTGACCGATGTATGCAACGGCCTACTCGGTGGGTTCGCAGCTATCACGGCCGGGTGCTCAGTCGTAGAGCCCTGGGCCGCGATAGTATGCGGATTCATAGCAGCATTAGTTCTAATTGGGTTCAATAAATTAGCCGAGAAGGCGAGCTACGACGACCCATTGGAGGCGGCACAACTTCACGGCGGTTGCGGCGCGTGGGGAATTATTTTCACGGCCTTATTTGCTAAAAAGGAGTATGTGAACCAAGTTTATCCAGGTAAACCGGGTCGATCATATGGGTTGTTAATGGGTGGTGGAGGAAAATTGTTGGGGGCACATGTAATACAAATATTGGTTATTATTGGTTGGGTAAGTGCCACAATGGGTCCACTTTTCTTTGTTCTTAATAAAATGAAATTGCTTAGAATCTCTACAGAGGATGAACTTGCAGGAATGGATCTTACTAGACATGGTGGATTTGCCTATGCATATGAGGATGAGTCACATAGACATGGTATTCAGTTGACAAAGATTGAACCTAATGATGTTTCTTCCACTCCCACCACATAA 1500 0.496 MSLPVCSPEQLAQFLGPNTTNAAAAANFICNQFTAVNNTFIDTTYAVDNTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFGTPSNGFIGRHFFGLKDVPDITFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASPTNTGNLLFGTGVIDFAGSGVVHMVGGIAGLWGALIEGPRIGRFDHTGRAITLRGHSASLVVLGTFMLWFGWYGFNPGSFTKISSAYESGNYYGQWSAVGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCGFIAALVLIGFNKLAEKASYDDPLEAAQLHGGCGAWGIIFTALFAKKEYVNQVYPGKPGRSYGLLMGGGGKLLGAHVIQILVIIGWVSATMGPLFFVLNKMKLLRISTEDELAGMDLTRHGGFAYAYEDESHRHGIQLTKIEPNDVSSTPTT 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal2g1123 499 TIGRFAM amt: ammonium transporter 48 472 IPR001905 GO:0008519|GO:0016020|GO:0072488
Lal2g1123 499 PANTHER AMMONIUM TRANSPORTER 5 492 - -
Lal2g1123 499 Pfam Ammonium Transporter Family 51 472 IPR024041 GO:0008519|GO:0016020|GO:0072488
Lal2g1123 499 ProSitePatterns Ammonium transporters signature. 203 228 IPR018047 GO:0008519|GO:0016020|GO:0072488
Lal2g1123 499 PANTHER AMMONIUM TRANSPORTER 1 MEMBER 1 5 492 - -
Lal2g1123 499 Gene3D Ammonium transporter AmtB like domains 26 491 IPR029020 -
Lal2g1123 499 SUPERFAMILY Ammonium transporter 45 453 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal2g1123 Lal-Chr2 8063653 8065152 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal2g1123 6 498 Inorganic Solute Cotransporters AT4G13510 81.238 0.0 820
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal2g1123 K03320 - egt:105950262 834.328