LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lal2g1115	ATGCATAACATTACTATGAACATGCCACCAATGGTTCAAACCTTCAACCCAGATGAACTATTCACACGTCGTTGCATTTGGGTTAATGGACCAGTAATAGTTGGTGCTGGTCCTTCAGGTCTTGCTGTTGCAGCATGTCTCAAAGAACAAAGTGTTCCTTTCATTGTTCTTGAAAGAGAAAATTGCATTGCTTCACTTTGGCAAAAAAGAACCTATGATCGACTTAAACTTCATCTTCCAAAACAATTTTGCCAACTACCCAATTTTCCTTTCCCTTTGGACTTCCCTGAATACCCAACAAAATTTCAGTTCATAAAGTATCTTGAATCTTATGCAAGTTACTTCAATATAACCCCACAGTTCAATGAAACAGTGCAATCTGCTAAGTGGATGGTGGTTGCTACAGGTGAAAATGCTGAGAAAGTTGTACCTGAATTTGAAGGGTTACAAGAGTTTGATGGACATGTCATGCATGCTTGTGATTACAAATCTGGGTTGAGTTATAATGGCCACAAAGTTCTTGTTGTTGGATGTGGAAATTCAGGCATGGAAGTTTCTCTTGATCTTTGTAACCATCATGCAAGTCCATTAATGGTGGTTAGAAGCTCAGTTCATGTATTGCCAAGAGAAGTATTTGGAAAATCAATTTTTGAGCTTGCAGTTAAGTTGATGAAGCATTTTCCTCTTAAGGTAGTTGATAAGATATTGCTGATTCTTGCTCGTTTGATTCTTGGAAATGTTGAAAAGTATGGTCTTAAGAGACCTTCAGAAGGGCCTTTAGAGCTTAAGAACACTACAGGGAAGACACCAGTGTTAGACATTGGAGCACTTAAGAAAATAAGATCTGGTAAAATCAAAGTTGTTCCTGGAATCAAAAAATTCACTAGAGGGAAAGTTGAACTTGTTGATGGTAGAGTTCTTCAGATCGATTCTGTTATTCTTGCTACTGGATATCGCAGCAATGTACCATCATGGCTAAAGGAAAATGATTTTTTTTCCAATGATGGGATTCCAAAAAATCCATTTCCAAATGGATGGAAAGGAAGTGTTGGTCTCTATGCTGTTGGGTTTACAAGGAGAGGCCTTTCTGGTGCATCTTTGGATGCAATTAGTGTCTCACATGACATTGCCAAAAGTTGGAAAGAGGAAACTAAACTCAAGAAAAAAGCAGTGGCTTCACATCATAGAAGATGCATGTCACACTTCTAA	1209	0.3813	MHNITMNMPPMVQTFNPDELFTRRCIWVNGPVIVGAGPSGLAVAACLKEQSVPFIVLERENCIASLWQKRTYDRLKLHLPKQFCQLPNFPFPLDFPEYPTKFQFIKYLESYASYFNITPQFNETVQSAKWMVVATGENAEKVVPEFEGLQEFDGHVMHACDYKSGLSYNGHKVLVVGCGNSGMEVSLDLCNHHASPLMVVRSSVHVLPREVFGKSIFELAVKLMKHFPLKVVDKILLILARLILGNVEKYGLKRPSEGPLELKNTTGKTPVLDIGALKKIRSGKIKVVPGIKKFTRGKVELVDGRVLQIDSVILATGYRSNVPSWLKENDFFSNDGIPKNPFPNGWKGSVGLYAVGFTRRGLSGASLDAISVSHDIAKSWKEETKLKKKAVASHHRRCMSHF	402

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lal2g1115	402	PANTHER	INDOLE-3-PYRUVATE MONOOXYGENASE YUCCA3-RELATED	15	130	-	-
	Lal2g1115	402	PANTHER	INDOLE-3-PYRUVATE MONOOXYGENASE YUCCA3-RELATED	129	400	-	-
	Lal2g1115	402	Pfam	Flavin-binding monooxygenase-like	132	323	IPR020946	GO:0004499\|GO:0050660\|GO:0050661
	Lal2g1115	402	Gene3D	-	31	382	IPR036188	-
	Lal2g1115	402	SUPERFAMILY	FAD/NAD(P)-binding domain	170	379	IPR036188	-
	Lal2g1115	402	PRINTS	FAD-dependent pyridine nucleotide reductase signature	31	50	-	-
	Lal2g1115	402	PRINTS	FAD-dependent pyridine nucleotide reductase signature	128	146	-	-
	Lal2g1115	402	PRINTS	FAD-dependent pyridine nucleotide reductase signature	172	190	-	-
	Lal2g1115	402	PANTHER	FLAVIN-BINDING MONOOXYGENASE-LIKE PROTEIN (AFU_ORTHOLOGUE AFUA_4G09220)	129	400	-	-
	Lal2g1115	402	PANTHER	FLAVIN-BINDING MONOOXYGENASE-LIKE PROTEIN (AFU_ORTHOLOGUE AFUA_4G09220)	15	130	-	-
	Lal2g1115	402	SUPERFAMILY	FAD/NAD(P)-binding domain	32	211	IPR036188	-
	Lal2g1115	402	PRINTS	Pyridine nucleotide disulphide reductase class-II signature	30	52	-	-
	Lal2g1115	402	PRINTS	Pyridine nucleotide disulphide reductase class-II signature	129	137	-	-
	Lal2g1115	402	PRINTS	Pyridine nucleotide disulphide reductase class-II signature	168	192	-	-
	Lal2g1115	402	Pfam	Pyridine nucleotide-disulphide oxidoreductase	32	127	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lal2g1115	Lal-Chr2	7984307	7986845	Dispersed/Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lal2g1115	K11816		-	gmx:100818345	679.478

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Lal2g1115	2	7984307	7986845	Lal9g1053	9	8482401	8485100	LSH
	Lal11g1105	11	14762787	14765605	Lal2g1115	2	7984307	7986845	PCT
	Lal20g0042	20	304744	306900	Lal2g1115	2	7984307	7986845	PCT