Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal2g1100 ATGATGCGAAAACAGGATATGAATATGGATATGGATATGGATCAAGTTGTGGAAATTCCTGATACACCTGATAGATTAACTACCAGGCATGGTGATCGGAAATATGTTGCTAATCCTGATGTGGATATCACATCCATGACTAAGAGTGATAGGGGCTTTCCTGGTGCTGATGAAATTAATAATGGCAATAACTATATAACAGTGTCCTCATCAGAGAAATCTCGCCCTTCTCAAAATGCTCCTATGTTTAGGAGAGTGCAGATACAGAAAATTTTCGGACCTGGGACAACACGCTCTAATAATGTACCTGAAAAGATGGATAAAGGGAAAACTGTAAGCTCCAACTCTCCTTCTAAATCATCTCAGCATGGGTCTGTTTCTGTTCTACATTTGAGTGAAGATAATGGAAGGTCTCAACAACTGAAATCAACTTTCTCAAATCATGGATCAAGAAATAGTGCAACTGAAGACAAGAAAGAGTTGAAAGCAAACTTTGGGAATTCTTCACTTCCATTCACTGCTGATTCCTCTAATGCATCTAGAAATGCCTATAGAGGAAAGTGTAATAAACCTCTTTCAGGTCTTAATACATCTGTGGACCGTGGAAAGAGCATTGCCCTGTCTAGTGATTCTCAATGTCCACAAAAAATTGAAAAGCAAGTGTCTCTGCACCCTCTTCTTTCATCTTCTCCAAGAGTTAGAGGGCAGAAAAGATTGGTACGAAATGGGTGCATTTCACCGCATAATATTGCAATAAGGGCTAAGCAAACAACTGAACAGAATAGTCATCAATCCATTGACATTGAACAGAGTCATGCAGGGCATTCAGTTTCTAGCAATACAATGTCCCCAATTAGTGTAGATGACATAGTTGCTGAAGAGAGAGGCAATGTTAGAGTGAAAGGGAAGGGAGTACTCATTCATCCTTCGTCCCATGAAATTAATGCTGGAACTATTCACACTGCGACCAGGCCCGTGATCAATTGTGAAGAAGTTGGTGGTACAAGTGATGCTACAAGAAATTCAATTAAATACTCCGAGGGGCAATCTGGTTGGAGAACTACACATAGCGATGTTGGAAGATCTATTAGCGGTCAAAATAGGAACATAATGGACAGAAGAGACATTGGGGGCTGTCAAAGCAGCAATGGTGTAACTGGCTCTTTATTAGATCATGCAGCTCAAGCAACTTCACTGACCATTCTGGAGGCAAATCAGTTGCCTGGAATACATTCTACAACAGATGCACTAACTAAAAGGCAACGGAAACGTGGATCAGCTTCAGGAAGTCATAATGAACCGTGTTATAATTCAGAAATTATGTTTCTTGGTTCTTCTGGGGAATCATCAAGCTCACCTCGCAGCCCTGTCTTGAGTTCCGAAGTGATTGAGTTGTTATCTGAACCAAGGTACACCAACAGGATTTCCATAGATTTAGATGACGATGACAACAATAGCTCAGATGCTCGGGTACAACAAGTAGAAGCAGATGAGATATTGGCACGTGAACTCCAAGAACAATTGTACCATGATGATTCTTTTGAAGGCAGAGGGATTGATGAACACTTAGCATGGGAGATGCAGAATTTTGGGGATCTTCTGCATACATCTATCGATAGTCACAACATACCTCATTCTATGCGGTTGCCAAGGGAACCTTCAAATAGACAGCCTCGTCCATCGACTCGTCAAAATCCTTCAAATAGGAGAGCTATGCCTCAAGTTCCTTTCTCTAATAGAACGTCACAGTTGAGGAATCGCACTATAAGACGGTCTCTTACACCTCGCATATCAACTAGAGGAAGACGCCCTCAGTTTCCTCTGGATATGGACCTAGATATGAGACTTGATATATTGGAAGCATTAGAGGATGCAGTAGGGGGTCTTAGTGATATGGGAATGGCTGATGATATCTTTCATGCTGGACGTGATTTCAATGAAGATGATTATGAAATGTTATTAGCTCTTGATGAAGGAAATCATCGTCATACTGGTGCATCTTCCAATCAGATCAATGGCTTGCCACAGTCCACCATCCAGACTGAAAACTGCACAGAGGTATGTGCTGTATGTCTTGAGACCCCAGTGAAAGGAGAAACTATTCGGCACCTACCTTGTTTACACAAATTTCACAAAGATTGTATTGATCCTTGGCTCAGAAGAAAACCATCATGCCCAGTGTGCAAGTCATCTATCATCTAA 2202 0.4133 MMRKQDMNMDMDMDQVVEIPDTPDRLTTRHGDRKYVANPDVDITSMTKSDRGFPGADEINNGNNYITVSSSEKSRPSQNAPMFRRVQIQKIFGPGTTRSNNVPEKMDKGKTVSSNSPSKSSQHGSVSVLHLSEDNGRSQQLKSTFSNHGSRNSATEDKKELKANFGNSSLPFTADSSNASRNAYRGKCNKPLSGLNTSVDRGKSIALSSDSQCPQKIEKQVSLHPLLSSSPRVRGQKRLVRNGCISPHNIAIRAKQTTEQNSHQSIDIEQSHAGHSVSSNTMSPISVDDIVAEERGNVRVKGKGVLIHPSSHEINAGTIHTATRPVINCEEVGGTSDATRNSIKYSEGQSGWRTTHSDVGRSISGQNRNIMDRRDIGGCQSSNGVTGSLLDHAAQATSLTILEANQLPGIHSTTDALTKRQRKRGSASGSHNEPCYNSEIMFLGSSGESSSSPRSPVLSSEVIELLSEPRYTNRISIDLDDDDNNSSDARVQQVEADEILARELQEQLYHDDSFEGRGIDEHLAWEMQNFGDLLHTSIDSHNIPHSMRLPREPSNRQPRPSTRQNPSNRRAMPQVPFSNRTSQLRNRTIRRSLTPRISTRGRRPQFPLDMDLDMRLDILEALEDAVGGLSDMGMADDIFHAGRDFNEDDYEMLLALDEGNHRHTGASSNQINGLPQSTIQTENCTEVCAVCLETPVKGETIRHLPCLHKFHKDCIDPWLRRKPSCPVCKSSII 733
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal2g1100 733 MobiDBLite consensus disorder prediction 60 84 - -
Lal2g1100 733 MobiDBLite consensus disorder prediction 46 197 - -
Lal2g1100 733 PANTHER RING FINGER AND PROTEASE ASSOCIATED DOMAIN-CONTAINING 488 731 - -
Lal2g1100 733 MobiDBLite consensus disorder prediction 416 436 - -
Lal2g1100 733 ProSiteProfiles Zinc finger RING-type profile. 688 729 IPR001841 -
Lal2g1100 733 MobiDBLite consensus disorder prediction 166 184 - -
Lal2g1100 733 MobiDBLite consensus disorder prediction 555 580 - -
Lal2g1100 733 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 655 733 IPR013083 -
Lal2g1100 733 MobiDBLite consensus disorder prediction 92 151 - -
Lal2g1100 733 CDD RING-H2_PA-TM-RING 687 729 - -
Lal2g1100 733 PANTHER - 488 731 - -
Lal2g1100 733 MobiDBLite consensus disorder prediction 541 580 - -
Lal2g1100 733 SUPERFAMILY RING/U-box 682 732 - -
Lal2g1100 733 Pfam Ring finger domain 688 729 IPR001841 -
Lal2g1100 733 SMART ring_2 688 728 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal2g1100 Lal-Chr2 7772837 7780686 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal2g1100 8 732 C3H Transcription Factor Family AT1G04790 33.729 2.76e-83 275
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal2g1100 - - lang:109336293 1028.08
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal2g1100 2 7772837 7780686 Lal9g1027 9 8117670 8126555 LSH