Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal2g1098 ATGATAATAGTTACAAATAATTCATATATATTTCCCGCCAAAACCAATCCTATTGCCGCTGTTTCTGTATTTGACACCACTGTTGAACACAACAGAAACACGATGGACATGGATTCAGAGATGGACATTCTCCCTGAAGAACTCGAATTACTCGAATCAAATTATCAACTCCTCGAACAAGATCAACAAGACTATTACCCCTACATCGACGAAACTCAACCGCAACCACAACCGCAATCGCCAAAATTAGTAGATCTCACTGTTCCTTCCCAACCCCAAACCAACGGTTATAAGCGTTCGCGTTCCAATTCTCCTCATGACGTGTCACTTCCGGTGCCGTCGGATGGGAAGAGGGTTAGGGTTTGTGATTCATCTGTTGCGGCTGAGGCGGAAGAGGAGGACTGGATTCGGTACTCGCCGCCTCCTGTTGCGACGGAGGAAGTGAGGTTTGTGAAGGAGAAAACGGTGTCCAGGTACGCGTCGGAGATTGAGGGAGAGTGTATGCCGATTACTGCGCCCGGTGGTGATAGGGTTTATGCGAAGATGGATCGGTTCGCAGGGGAGGAGCGGTTAAAGAAGCTGGATTGTAGTGGATATGGTGCTGATCTTAGTTCAGAGCCAATTGGTGTTTTACTTGAAAGATTGGAGCAGGAGGCTTTCACCAAGACTTTGGAAGCTAGTTCGGAGTGCCAAAGTGTGTTAGAAGTTCCAGATACAAGAGTGGTCCATGAGCAACTTTGGGTAGATAAGTATGCTCCAAAATCATTTACTGAGCTTCTTAGTGATGAACAGACAAATCGAGAGGTACTCTTGTGGTTGAAACAATGGGATTCTAATGTTTTTGGATCTGAAATTCGAAGTACATCAGATGATGTTTTATCTGCCTTGAAACGCCATTCTTCTATTGCCCAAAATCAGAAACCTTTTGATTCAAAGTTTCCTAGGATAAACAGAGGATCCAAATGGAGCAGTGACAAGTATAGAAATGCTAGAAGTGTGGATGACAGCGGTAATTCAAAGAGCACTCAAGACACGTGGAATACGAAGTCAAGGAGTACAGGTCCACCAGAACAGAAGATACTTCTGCTTTGTGGACCACCAGGCCTTGGAAAAACAACGCTTGCCCATGTAGCTGCTAGGCATTGTGGATATCTTGCCGTGGAGGTCAATGCCAGTGATGATCGTTCTGCATCAACAATTGAAACCAAAATACTTGACGTGGTTCAGATGAACTCTGTCTTGTCCAGTTCTAGACCCAAATGTCTGGTGGTGGATGAAATTGATGGAGCCCTTGGTGATGGTAAGGGTGCTGTGGAGGTTCTTTTAAAGATGATTTCTGCTGAAAAGAAGCCTGATGGAGGGAAGCAAAGTTTGGGCAAAGAGCAACAGGGAAGGAAATCGTCAAAGAAGGGACGGAAAACAGCATCACTGTCAAGACCTGTGATTTGCATATGTAATGACCTATATGCACCTGCCTTAAGACCATTACGTCAGGTTGCCAAGGTTCATATATTTGTTCAACCAACGGTTAGTCGTGTGGTAAGCAGTCACGCACCATTTGATCTTTTAAATGGCCTTTGTAGGCTTAAATATATATGCAACAAGGAGGGGATGAATGCCAGTGCCATTGCACTTACTGCTCTAGCAGAATATACAGAATGTGATATACGCTCTTGCTTGAATACTCTCCAATTTATCTCCAAGAAGAATGAAACCCTCAATGCGTTTGATGTTGGTTCTCAAGTAGTTGGCCAGAAGGACATGTCAAAAAATGTAATAGACATCTGGAAAGAGATTTTCCAAAGGAAGAGAATGAAGATGGAAAGAACATCACACAGAAGCAAGTCCTTTGAATTTGGCTCCTTGTACTCCCTTGTATCATACCGTGGTGATTATGACTTGATTATGGATGGAATTCATGAAAATATTTTGCAGCTCAATTTCCATGATCCAGTGATGCAAAAAACTGTCAAGTGCTTCAACAGTCTTGAAGTTTATGATATAATGCACCAATATATAATGCGTACACACCGAATGTCACTTAATGTTTATTTGCCCCCAGTAGCAATCACTGTACATAATATAGTAGCTCAAGTGGCATTACAACTACTGTCAGATAAGGAGAAGAATGATCTTAATCAATTAGTTAGCACAATGGTCTCTTACGCTATAACATATAAGGCTAAGAAATCTGATATGCTGCTGAATAACCTGAGGCATGAAGTAGCGGATGACTTGGTTATGTCACTTGTTCCCCCAATCAGTGACTTCATCAACTTCCAGGGTTATACGTCAAATCATTATGTGCTTTCTTTGGCTATGAAGCAGGTTGAAAGGCACAAGATTTTGCAGTATAATGACAAAACTATGGCTTTAGCAAATGGAGGCCATGAAGTTATTGATGCTGGAACCAAAAATTTCCAGTTAGCCAATAGCAATCATGCAGCTGTGGTTGATGTGAAAACCGTTCAAAATCAGAATGTTTTATCAAAGCAATTAAATGCAAATCCTACTACAGTTTCGCGAAACTTCAATTCCAGTGAAGTTGTAACTGACAATTCAAGACTGCTAAACAAGGGAAATAGGAAAAACCCATTCAGTTTCTTTGCCAGGGGTAAAAAGTCAAATGCTGAGGGTTTTCAAAGTAATGATGGATCTCTGCAGAAAGAATCAGCATCAAAGAAAGATCAATTCCCTTTACTTTTTAAATTTAACGAGGGCTTTACAAATGCAGTCAAAAGGCCTGTTCGTATCCGTGAATTTCTATCATAA 2772 0.417 MIIVTNNSYIFPAKTNPIAAVSVFDTTVEHNRNTMDMDSEMDILPEELELLESNYQLLEQDQQDYYPYIDETQPQPQPQSPKLVDLTVPSQPQTNGYKRSRSNSPHDVSLPVPSDGKRVRVCDSSVAAEAEEEDWIRYSPPPVATEEVRFVKEKTVSRYASEIEGECMPITAPGGDRVYAKMDRFAGEERLKKLDCSGYGADLSSEPIGVLLERLEQEAFTKTLEASSECQSVLEVPDTRVVHEQLWVDKYAPKSFTELLSDEQTNREVLLWLKQWDSNVFGSEIRSTSDDVLSALKRHSSIAQNQKPFDSKFPRINRGSKWSSDKYRNARSVDDSGNSKSTQDTWNTKSRSTGPPEQKILLLCGPPGLGKTTLAHVAARHCGYLAVEVNASDDRSASTIETKILDVVQMNSVLSSSRPKCLVVDEIDGALGDGKGAVEVLLKMISAEKKPDGGKQSLGKEQQGRKSSKKGRKTASLSRPVICICNDLYAPALRPLRQVAKVHIFVQPTVSRVVSSHAPFDLLNGLCRLKYICNKEGMNASAIALTALAEYTECDIRSCLNTLQFISKKNETLNAFDVGSQVVGQKDMSKNVIDIWKEIFQRKRMKMERTSHRSKSFEFGSLYSLVSYRGDYDLIMDGIHENILQLNFHDPVMQKTVKCFNSLEVYDIMHQYIMRTHRMSLNVYLPPVAITVHNIVAQVALQLLSDKEKNDLNQLVSTMVSYAITYKAKKSDMLLNNLRHEVADDLVMSLVPPISDFINFQGYTSNHYVLSLAMKQVERHKILQYNDKTMALANGGHEVIDAGTKNFQLANSNHAAVVDVKTVQNQNVLSKQLNANPTTVSRNFNSSEVVTDNSRLLNKGNRKNPFSFFARGKKSNAEGFQSNDGSLQKESASKKDQFPLLFKFNEGFTNAVKRPVRIREFLS 923
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal2g1098 923 CDD AAA 356 446 - -
Lal2g1098 923 Pfam ATPase family associated with various cellular activities (AAA) 361 487 IPR003959 GO:0005524|GO:0016887
Lal2g1098 923 Gene3D - 526 591 - -
Lal2g1098 923 PANTHER P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASES SUPERFAMILY PROTEIN 40 699 - -
Lal2g1098 923 PANTHER P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASES SUPERFAMILY PROTEIN 699 922 - -
Lal2g1098 923 Coils Coil 41 61 - -
Lal2g1098 923 MobiDBLite consensus disorder prediction 307 358 - -
Lal2g1098 923 MobiDBLite consensus disorder prediction 319 333 - -
Lal2g1098 923 MobiDBLite consensus disorder prediction 334 355 - -
Lal2g1098 923 SMART AAA_5 357 511 IPR003593 -
Lal2g1098 923 MobiDBLite consensus disorder prediction 69 109 - -
Lal2g1098 923 MobiDBLite consensus disorder prediction 69 117 - -
Lal2g1098 923 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 245 575 IPR027417 -
Lal2g1098 923 MobiDBLite consensus disorder prediction 450 473 - -
Lal2g1098 923 Gene3D - 244 506 IPR027417 -
Lal2g1098 923 CDD HLD_clamp_RFC 528 578 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal2g1098 358 567 Core DNA Replication Machinery Family AT5G22010 29.778 5.51e-11 64.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal2g1098 K11269 - gmx:100791474 1006.13