Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal2g1079 ATGAAGAATTCTGTTTCAGAAACCAGTTTTTATGTTGAGAGTGATGAAGAAGATGCAGAAAAGGAAATTCAAAATGATGGGAATGATTCAGATTATTCCATTGACTCAAATGGAAACAATCCTCAAAGGAAACCAAGTTCATATAGCATGCAATGGCCTCAAAGTTATAGGCAATCCATTGATCTATATGGTAGTGTACCATCACCGAGTATCGGATTTCTTGGCACACCCTCCCTATCGAGGTTAGGCAGTTCTTTCATTTCTTCAACTCTGATAAGGAGGCAGCACACTGCTGAAAAACTACCACCAGTGAAAAAACCTCTGTTACAACTGGAAGCAGATGAGAAACAGCGGCGTAGCTCTCATGGCTTGATTCCTCCCATAGGATCTAGGAAGTCTTCGATTCAGAAGGATGCTTCCAAGGTTTGTCATGAAATTGAGTTTGCTGGCCAGTGCACTTTTGGACAAGCTGTGCTTAATGGCATAAATGCCCTTTGTGGTGTAGGAATCCTTTCAATACCTTATGCTGTCCGAGAAGGTGGATGGGTTGGGATTGGTATCTTGTTAATATTTGCGGTTTTCTCATTTTATACCGGGTTGCTCTTGCGTTATTGCTTGGATAGTGAAGCTGGGCTTGAGACATACCCTGACATTGGCCAAGCTGCTTTTGGTACCACTGGACGTGTTTTCATTTCGGCTAGTTGCATTGAGTATATAATTTTGGAGAGCGACAACTTGTCTTCATTATTTCCAAATGCACACTTAAGTTTGGGTGGAATTGATTTGAATGCACACATTCTGTTTGCACTCTTTGCCACTTTGGCTATTCTTCCAACTGTTTGGCTGCGAGACCTACGCATTCTCAGTTACATCTCAGCGGGTGGAGTTATTGCATCTATTTTAGTGGTTTTGTGCTTGTTCTGGGTTGGCCTGCTAGACAATGTTGCTATTCCCAGCCAAAGATCAACACTCAATCTTGCAACTTTCCCTGTTGCTATGGGTCTATATGGTTACTGCTATTCAGGACATGCTGTGTTCCCAAACCTTTACACAGCCATGGCGAACCGAAATCAATTCCCTGCAGTGCTCTTAACATGTTTTGTTATTTGTACTGCCATGTATGTTGGAGTTGCTGTTGTGGGTTACTTAATGTTTGGAGATGGTACACTCTCTCAGTACACACTTAACATGCCTCAGAGCTCAGTGGCCACCAAGATTGCCATGTGGACTACGAACAGCGCTGGTAGTTTCTACATTGCTTGTTGGCCTGTCGATTCCCTTTTTCGGTCTGGTGATGTCATTGATAGGATCTTTACTGACAATACCTTGATTATGCCCTGTGCTTGTTTCCTAAGCATACGAAGGGGTAGAGTTTCGCGCTTTCAGATAGCATTTTGTATTACAATCATGACAGTAGGCATTGTTGCATCGGTTATTGGATCATACTCAGCGATCTCCGAGATTATTGAGAGTTTGAGAGGATGA 1485 0.4269 MKNSVSETSFYVESDEEDAEKEIQNDGNDSDYSIDSNGNNPQRKPSSYSMQWPQSYRQSIDLYGSVPSPSIGFLGTPSLSRLGSSFISSTLIRRQHTAEKLPPVKKPLLQLEADEKQRRSSHGLIPPIGSRKSSIQKDASKVCHEIEFAGQCTFGQAVLNGINALCGVGILSIPYAVREGGWVGIGILLIFAVFSFYTGLLLRYCLDSEAGLETYPDIGQAAFGTTGRVFISASCIEYIILESDNLSSLFPNAHLSLGGIDLNAHILFALFATLAILPTVWLRDLRILSYISAGGVIASILVVLCLFWVGLLDNVAIPSQRSTLNLATFPVAMGLYGYCYSGHAVFPNLYTAMANRNQFPAVLLTCFVICTAMYVGVAVVGYLMFGDGTLSQYTLNMPQSSVATKIAMWTTNSAGSFYIACWPVDSLFRSGDVIDRIFTDNTLIMPCACFLSIRRGRVSRFQIAFCITIMTVGIVASVIGSYSAISEIIESLRG 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal2g1079 494 PANTHER TRANSMEMBRANE AMINO ACID TRANSPORTER FAMILY PROTEIN 21 411 - -
Lal2g1079 494 PANTHER TRANSMEMBRANE AMINO ACID TRANSPORTER FAMILY PROTEIN 442 491 - -
Lal2g1079 494 PANTHER OS05G0424000 PROTEIN-RELATED 442 491 - -
Lal2g1079 494 PANTHER OS05G0424000 PROTEIN-RELATED 21 411 - -
Lal2g1079 494 MobiDBLite consensus disorder prediction 29 50 - -
Lal2g1079 494 MobiDBLite consensus disorder prediction 1 50 - -
Lal2g1079 494 Pfam Transmembrane amino acid transporter protein 152 477 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal2g1079 Lal-Chr2 7551407 7559112 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal2g1079 1 411 Amino Acid or Auxin Permease AAAP Family AT2G39130 64.720 0.0 554
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal2g1079 K15015 - gmx:100781123 632.484
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal2g1079 2 7551407 7559112 Lal9g0988 9 7634564 7638533 LSH