Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal2g1048 ATGGAACACAAAGTGAAAAAAACCACATCTCCACCACCACCAAATCCAACTCCTATTCAAACTATGTTCTCTAACTCTCCTCTCTCTCCCTCTTCTTCACCACCTTTTCCTTCTCCTTCTCAATCTCCTCCTTCTCCCTTTCCTCCACCACCCTCTCCTCCTCCACCAGTGGTACTCAGCCCTTGTGCTGCCTGCAAGATCCTTCGCCGCCGCTGTGTCGAGAAATGTGTATTGGCTCCTTATTTCCCTCCTACTGATCCAATCAAATTCACCATTGCTCATAGAGTCTTTGGATCTAGCAACATCATCAAGTTCTTGCAGGAACTACCAGAGTCTCAAAGAGCAGATGCTGTGAGCAGCATGGTGTATGAAGCAAATGCTAGAATAAGAGACCCAGTATATGGTTGTGCAGGTGCAATATGCCAACTTCAAAAACAAGTTATTGAGCTACAAGCACAATTGGCCAAAGCACAAGCTGAGTTAGTCAACATGCACTGCCAACAAACCAATTTAGTTGCACTGATTTGCATGGAGATGACTCAATCTCAGGACCAACAATTGCTTCAGCCTCAACAACACATTGATATGAGTTGCTTTTTAGATGACAATACTTTGGGTTGTTCATGGGAACCTCTTTGGACATGA 645 0.445 MEHKVKKTTSPPPPNPTPIQTMFSNSPLSPSSSPPFPSPSQSPPSPFPPPPSPPPPVVLSPCAACKILRRRCVEKCVLAPYFPPTDPIKFTIAHRVFGSSNIIKFLQELPESQRADAVSSMVYEANARIRDPVYGCAGAICQLQKQVIELQAQLAKAQAELVNMHCQQTNLVALICMEMTQSQDQQLLQPQQHIDMSCFLDDNTLGCSWEPLWT 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal2g1048 214 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 48 202 - -
Lal2g1048 214 MobiDBLite consensus disorder prediction 1 53 - -
Lal2g1048 214 ProSiteProfiles LOB domain profile. 60 161 IPR004883 -
Lal2g1048 214 MobiDBLite consensus disorder prediction 30 53 - -
Lal2g1048 214 Coils Coil 140 167 - -
Lal2g1048 214 PANTHER LOB DOMAIN-CONTAINING PROTEIN 1 48 202 - -
Lal2g1048 214 Pfam Lateral organ boundaries (LOB) domain 61 158 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal2g1048 Lal-Chr2 7228432 7230312 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal2g1048 57 214 AS2 family AT1G07900 69.939 8.56e-76 225
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Lal2g1048 LOB 2.2e-40 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal2g1048 - - lang:109337699 307.375
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal2g1048 2 7228432 7230312 Lal2g1048 2 7228432 7230312 ECH