Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal2g1046 ATGGGGAGAAAAGGTAGTTGGTTTTCTGCACTGAAGAAAGTTTTTAGTTCAGATTCCAGAAAAGATAAGAAAAATGAAAAGCAGAAAAACCACAAGTCAAAGAAAAAATCTAGTGGCCATGACAAGGATTCAGAACATGCATTCGAAGAAGCACCGGTTGCTGTTGTTCCCCCTCTTCCACCAATACAAGAAGTTAAATTATCTGAGGCAGAGAATGAACAGAGCAAGCATGCTTATTCGTTGGCATTTGCCACCGCCGTTGCAGCAGAAGCCGCTGTTGCTGCTGCTCAGGCTGCTGCTGAGGTTGTTCGTCTCACGAGTATGCCCCGTTACCACGGAAAGACAAAGGAAGAAATAGCAGCTATCAAGATTCAGACCGCATTCCGTGGACATATGGCGAGAAGGGCGCTGCGTGCTTTGAAAGGTTTGGTGAGAATGAAAACAATAATACAAGGGCAATCAGTTAAAAGGCAAGCAACTAGCACCTTACGATGCATGCAAACTCTTGCAAGACTTCAGTCTCAGATTCGTGAAAGGAGAATTAGAATGTCTGAGGAGAATCGGGCTCTTTTGCGGCAATTACAGCAGAAACATGAAAAGGAACTCGAGAAGTTGCATATTGCTCTGGTTGGAGAAGAATGGGATGATAGTTTGCAAACAAAGGAGCAAATTGAAGCAAGATTGTTGCACAAGCAAGAAGCTGCTTTGAGAAGAGAGAGAGCTTTGGCCTATGCATTCTCACACCAGCAAATAGGGAATAACTCATCAAAATCAGTAAATCCCACATTTATGGATCCAAACAATCCACATTGGGGATGGAGTTGGCTAGAGCGATGGATGGCTGCGCGGCCATGTGAGGATCGAAGTACTATGGATTCCAACGATCGCGCATCGATAAAGAGTTCTGTAAGCCATGCCTACAAGGCTTCGCCTGCTGGCCGAAAAGCAAGCCAACATGGAAGTCACAATTCCCCTTCAACTCCAGCATCAAATGCCCCATCCTTGTCATCTGTTAATGGAAAGGCAAGGCCATCAAGTTCAAAGGGAAGTGGCTGGCGCGATGAGGACTCGAGAAGCTTGTTTAGCGTCCGGTCAGAACGCTATCGCAGGCATAGCATTGGTGCATCATCATTGAGAGATGATGAAGAAAGCCTTGAAACCTCACCAGCATTTCCAAGTTACATGAGGCCGACGAGTTCGGCAAAGGCCAGATCAAGAACACAAAGGCCATCACTACTTAGTATGGAGAAAAATGGAACACCTGACAAAGGAGCTGCTATTTCGGCAAAAAAGCGGCTTTCTTTCCCTGCTTCTCCAGCTTCTTCAAGAAGACACTCTGGTCCTCCTATGGTTGAAATGGTCCAATAA 1368 0.4569 MGRKGSWFSALKKVFSSDSRKDKKNEKQKNHKSKKKSSGHDKDSEHAFEEAPVAVVPPLPPIQEVKLSEAENEQSKHAYSLAFATAVAAEAAVAAAQAAAEVVRLTSMPRYHGKTKEEIAAIKIQTAFRGHMARRALRALKGLVRMKTIIQGQSVKRQATSTLRCMQTLARLQSQIRERRIRMSEENRALLRQLQQKHEKELEKLHIALVGEEWDDSLQTKEQIEARLLHKQEAALRRERALAYAFSHQQIGNNSSKSVNPTFMDPNNPHWGWSWLERWMAARPCEDRSTMDSNDRASIKSSVSHAYKASPAGRKASQHGSHNSPSTPASNAPSLSSVNGKARPSSSKGSGWRDEDSRSLFSVRSERYRRHSIGASSLRDDEESLETSPAFPSYMRPTSSAKARSRTQRPSLLSMEKNGTPDKGAAISAKKRLSFPASPASSRRHSGPPMVEMVQ 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal2g1046 455 MobiDBLite consensus disorder prediction 316 346 - -
Lal2g1046 455 MobiDBLite consensus disorder prediction 391 415 - -
Lal2g1046 455 Pfam IQ calmodulin-binding motif 120 138 IPR000048 GO:0005515
Lal2g1046 455 MobiDBLite consensus disorder prediction 374 455 - -
Lal2g1046 455 MobiDBLite consensus disorder prediction 17 53 - -
Lal2g1046 455 Coils Coil 169 204 - -
Lal2g1046 455 ProSiteProfiles IQ motif profile. 117 145 IPR000048 GO:0005515
Lal2g1046 455 Gene3D iswi atpase 114 154 - -
Lal2g1046 455 PANTHER PROTEIN IQ-DOMAIN 1-LIKE 1 452 - -
Lal2g1046 455 SMART iq_5 116 138 IPR000048 GO:0005515
Lal2g1046 455 MobiDBLite consensus disorder prediction 287 358 - -
Lal2g1046 455 PANTHER IQ-DOMAIN 5-RELATED 1 452 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal2g1046 Lal-Chr2 7212085 7215866 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal2g1046 1 452 IQD Protein Family AT5G03040 47.479 5.87e-125 369
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal2g1046 - - lja:Lj0g3v0301539.1 546.199
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal2g1046 2 7212085 7215866 Lal2g1046 2 7212085 7215866 ECH