Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal2g1037 ATGTTTGTTGCTATGGAGAGGGTATCAGAAAAGTGCTTAGATTCTCAATTATGGCATGCTTGTGCTGGTTCCATGGTTCAAATGCCACATCTCAACTCAAAAGTATTCTACTTTCCACAGGGCCATGCAGAACATGCCCTTGGCAAAGTAGATTTTGGGAACACACGAATTCCCCCACTCATCCCTTGCAGGGTTAATGCTATGAAATTTATGGCAGACCTTGACACTGATGAGGTTTATGTGAAGTTGAGGTTAACCCCTTTGAGAGAAAATGGATTTGATTTGGAAGATGATTGTTTCAAAGGGACTAGAGGAGTTGTTGAGAGTCAAGAGAAACTATCTTCATTTGCCAAGACATTGACTCAATCTGATGCCAACAATGGTGGAGGGTTTTCGGTGCCCCGCTATTGCGCGGAGACTATCTTCCCAAAGTTGGATTATTCTGCTGAGCCTCCGGTTCAGACCATCATGGCCAAGGATGTGCATGGACAATGCTGGAAATTTCGGCATATCTATAGAGGGACACCGAGGAGGCATCTTTTAACCACCGGATGGAGCAATTTCGTGAACCATAAGAAGCTTGTGGCAGGTGATTCTGTAGTGTTTTTGAGGGCTGAGAATGGTGATCTTTGTGTCGGGATAAGGAGGGCTAAGAAAGGGACTGTTGGAGGGAGTGAGTTCATGTCATCCGTTTGGAACAACAACAAATTGGTACCTTTATTATTTGGTGGTAGGAATGAGAACAAGATGTTGATGAGGAGAAAAAATGGTGAGGAATTGATGGGAAAAGTGGCAGCTGAATCTGTTGTTAAAGCTGTGACTTGTGCTGTTAATGGTATGCCATTTGAGGTTGTTTACTATCCAAGGGGTAGCACCCCTGAGTATTGTGTTAAGGCCTCTTCTGTGAGAGCTGCAATGCAAATACAGTGGTGTTCTGGGATGAGATTCAAGATGCCCTTTGAAACTGAGGATTCTTCTAGGATCAGCTGGTTCATGGGAACCATATCTTCTGTCCATGTTGTTGATCCCATTCGCTGGCCTAATTCGCCATGGCGCCTTCTTCAGGTGGTGTGGGATGAACCAGTTATACTCCAAAATGTTAAGTGTGTAAATCCTTGGTTGGTTGAGCTAGTCTCAAACACCCCTAATTTCAATCTCTCCCCATTTTCATCACCAAGAAAGAAACCGAGGTTTCCGCAGACACCAGATTTTCACCACATCAACCAACTTCCAATGCCGTCGTTTTACAACAATCATCTCAACCATACTAACTCTGTATGTAGCATTCAAGACAATAGTTCTGCAGGCATACAGGGAGCCAGGCATGCTCAATTTGGACTGAACAAACCGCAAACAGATGCATTTCCCGGGGCACTCCCATGGCTTAATCATTCAGCACAACCTACTAGACCTCCTCGTGACGCCTACAAGATTAAGAACAATGTGGATATATCAGGCTTATTGACTATTGGAAATCCAAGCCAGAGTTCAAAGGAACCCATTAAAGCGAAATCACCTTACATCTTGTTGTTCGGACAACTCATACAAACTGAACAGCATAATTCTAACATCATCTCCACTGGTACAAATGGGAATTGTTCAACTAACACTCCTTTGTGTAAGACTTCAAATGCTTCTGATGGCTTGAGTTCAGACTTACTTCAAAATAGTCCAATGGAGAAGAATTCTTCTGATGAAGGGTCTCCTCGGTACAAAGATCAGCACAAATCTGATCTTCGATCCGAAAATGTTAACCGATTGTGTTTGGCAATGTGA 1776 0.4341 MFVAMERVSEKCLDSQLWHACAGSMVQMPHLNSKVFYFPQGHAEHALGKVDFGNTRIPPLIPCRVNAMKFMADLDTDEVYVKLRLTPLRENGFDLEDDCFKGTRGVVESQEKLSSFAKTLTQSDANNGGGFSVPRYCAETIFPKLDYSAEPPVQTIMAKDVHGQCWKFRHIYRGTPRRHLLTTGWSNFVNHKKLVAGDSVVFLRAENGDLCVGIRRAKKGTVGGSEFMSSVWNNNKLVPLLFGGRNENKMLMRRKNGEELMGKVAAESVVKAVTCAVNGMPFEVVYYPRGSTPEYCVKASSVRAAMQIQWCSGMRFKMPFETEDSSRISWFMGTISSVHVVDPIRWPNSPWRLLQVVWDEPVILQNVKCVNPWLVELVSNTPNFNLSPFSSPRKKPRFPQTPDFHHINQLPMPSFYNNHLNHTNSVCSIQDNSSAGIQGARHAQFGLNKPQTDAFPGALPWLNHSAQPTRPPRDAYKIKNNVDISGLLTIGNPSQSSKEPIKAKSPYILLFGQLIQTEQHNSNIISTGTNGNCSTNTPLCKTSNASDGLSSDLLQNSPMEKNSSDEGSPRYKDQHKSDLRSENVNRLCLAM 591
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal2g1037 591 MobiDBLite consensus disorder prediction 565 582 - -
Lal2g1037 591 MobiDBLite consensus disorder prediction 544 564 - -
Lal2g1037 591 Gene3D - 309 383 - -
Lal2g1037 591 PANTHER AUXIN RESPONSE FACTOR 16 6 559 - -
Lal2g1037 591 ProSiteProfiles B3 DNA-binding domain profile. 116 218 IPR003340 GO:0003677
Lal2g1037 591 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 6 559 IPR044835 GO:0003677|GO:0006355|GO:0009725
Lal2g1037 591 CDD B3_DNA 115 216 IPR003340 GO:0003677
Lal2g1037 591 Gene3D - 113 218 IPR015300 -
Lal2g1037 591 Pfam Auxin response factor 272 355 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Lal2g1037 591 Pfam B3 DNA binding domain 116 217 IPR003340 GO:0003677
Lal2g1037 591 SUPERFAMILY DNA-binding pseudobarrel domain 108 217 IPR015300 -
Lal2g1037 591 MobiDBLite consensus disorder prediction 544 583 - -
Lal2g1037 591 SMART B3_2 116 218 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal2g1037 Lal-Chr2 7118313 7121624 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal2g1037 5 577 B3 DNA Binding Superfamily AT4G30080 55.481 0.0 598
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Lal2g1037 B3 1.3e-21 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal2g1037 - - gmx:100803053 827.009