Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal2g1030 ATGGAAGATTCAGAGGAAGATGAGCTTCTGAATCTTAGCCTTTCAGTTTCTTCAGGTAGAGAAAGGAAAAAGAAGGGAAAGACAATTAGGGCTAATAATGCTAACTCTATTATTAGTCCTATGATGAACTCCTCCTATGAAGGGAACATCTTTAGGGTCCTCCAAATTAGGGAGAACATGTTAAGACAAGACTTTCAATATAGAAAGAAAGGAGTGGTTGAAGATGGAAATGGCTTCCCTCTGATCCACTTGCTCCTTAAAACTGCTACTGCTGTTGATGAGAACAACTATGATGCAGCATTAGAGAATCTCACAGAACTTTATCAAATAGTTTCCTTAACTGGTGACTCAGTTCAAAGAGTTGTGGCCTATTTTTCTGATGGTCTTGCTGCAAGGATTCTCACAAGGAAATCACCATTCTATGACATGCTCATGGAGGAACCAACAAGTGAGGAAGAGTTTCTTGCTTTCACAGATCTCTATAGGGTCTCACCTTATTACCAATTTGCACATTTCACTGCAAACCAAGCAATCTTAGAAGCATTTGAGGCTGAAGAAGAAAGGAACAACCGTGCACTACATGTCATAGACTTTGATGTCTCCTATGGTTTTCAATGGCCTTGTCTTATTCAATCACTTTCCGAGAAGGCTACAAGTGGAAACCGCATATCACTCAGGATAACAGGATTTGGCAACAACATGAAAGAGCTGCAAGAAACTGAGGCTAGATTGGTAAGCTTCTCAAAGGGTTTTGGTAACCTTGTGTTTGAATTCCAATGGTTGTTAAGAGGGTCAAGGATTATTAACTTAAGGAAGAAGAAAAATGAAACTGTGGCTGTGAACTTGGTTTCTTATTTGAACACTTTGAGTAGTTTTATGAAGATCTCTGACACATTGGAATTTGTTCATTCTCTTAGACCCTCCATTGTGGTGTTGGTGAAACAAGAAGGTAGCAAGGGTGTTAGGACTTTCATGTCAAGGTTCACTGAGTCTTTGCACTACTTTGCAGCCATGTTTGATTCACTTGATGATTGTCTTCCACTTGAGAGCACAGAAAGGCTGAGGATTGAGAAGAAGCTTCTAGGTAAAGAGATTAAAAATGTACTAAACTATGACATGGATAATGGTTATGATTGTACAAAATATGAGAGAATGGAATCATTAAAAGCAAGAATGGAGCATCATGGTTTTGGTGGAACACAAATAAGCTCAAAGAGTATGATCCAAGCAAAACTACTTCTGAAGATGAGGACCCATTATTGTCCACTTCAGATTGAGGAAGAGGGTGGTGGTGGTGGTGGTGGTTTCAGGATTTGTGAAAGGGATGAAGGAAGAGCAATATCTTTGGGGTGGCAACATAGATTTCTTCTTACTGTCTCAGCATGGCAACCACTCTGA 1398 0.397 MEDSEEDELLNLSLSVSSGRERKKKGKTIRANNANSIISPMMNSSYEGNIFRVLQIRENMLRQDFQYRKKGVVEDGNGFPLIHLLLKTATAVDENNYDAALENLTELYQIVSLTGDSVQRVVAYFSDGLAARILTRKSPFYDMLMEEPTSEEEFLAFTDLYRVSPYYQFAHFTANQAILEAFEAEEERNNRALHVIDFDVSYGFQWPCLIQSLSEKATSGNRISLRITGFGNNMKELQETEARLVSFSKGFGNLVFEFQWLLRGSRIINLRKKKNETVAVNLVSYLNTLSSFMKISDTLEFVHSLRPSIVVLVKQEGSKGVRTFMSRFTESLHYFAAMFDSLDDCLPLESTERLRIEKKLLGKEIKNVLNYDMDNGYDCTKYERMESLKARMEHHGFGGTQISSKSMIQAKLLLKMRTHYCPLQIEEEGGGGGGGFRICERDEGRAISLGWQHRFLLTVSAWQPL 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal2g1030 465 Pfam GRAS domain family 81 463 IPR005202 -
Lal2g1030 465 PANTHER OSJNBA0084A10.13 PROTEIN 8 463 - -
Lal2g1030 465 ProSiteProfiles GRAS family profile. 72 463 IPR005202 -
Lal2g1030 465 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 8 463 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal2g1030 Lal-Chr2 7077294 7078691 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal2g1030 87 464 GRAS Transcription Factor Family AT3G54220 34.527 3.42e-54 190
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Lal2g1030 GRAS 1.4e-89 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal2g1030 - - gmx:100813979 711.835
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal2g1030 2 7077294 7078691 Lal2g1030 2 7077294 7078691 ECH
Lal2g1030 2 7077294 7078691 Lal12g0130 12 903952 905364 PCT
Lal2g1030 2 7077294 7078691 Lal24g0106 24 711563 713011 PCT
Lal12g0130 12 903952 905364 Lal2g1030 2 7077294 7078691 PCT
Lal24g0106 24 711563 713011 Lal2g1030 2 7077294 7078691 PCT