Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal2g0982 ATGCTGGGGGACTCAGCTTTGTTAGGAACAGGAGGAGGTGGTGGTGGCGGTAATTCTGGTGATGCAGTAGCTGCTATTGTATCAGCAGCTGTTGCATCAGCAGTAGCAGTTGCAGGATCAGCTCATGAGGGTGGTTCTGACACCGCACCCGGCGGTGACGGTGGTGGTGGTGGAGGATCAATTTCAGGAGATGATGACAAAGGTAGAGGAGAGGAAGGTGACCGGAGCTTTGGTGGCAACAGGTGGCCAAGACAGGAGACTCTTGCGTTGTTGAAAATAAGGTCAGATATGGACGTGGCGTTTAGAGGTTCAAGTGTTAAGGGTCCCTTGTGGGAAGAGGTTTCAAGGAAGCTGGCAGAGCTTGGGTACCACAGAAATTCTAAGAAATGCAAAGAGAAATTCGAAAATGTTTACAAGTACCACAAGAGAACAAAGGAAGGTAGAAGTGGAAAATCATTTGGCAAAACTTATAGATTCTTTGATCAATTACAAGCACTTGAAGGAAATAACCAGCCTGCAAAAACAACTTCAATACCACCACAAACAACAGCACCATTACAAGTAACACCAGTTTCAATGGTGGTGACCGCTTCATCATTGCCACAGCAAATTCCAAATACAACAACAACAATACCAGTGTTTGCAGCTTCTAAAACCACTAATCTAAACAGTGTTAGTGTTCCTTTTTCACATGCCAACATTGTTCCATCAACAACAACACTCCCTATCTCTGCTACAACCCCATCAATAAACCTCACAATCCCTTCTTTCCCACCACCAAATAACCCTACACATTTCAAACCATCATCAACAATAAACCCTACAAGTAACCCTTCTCATGTTAACAATAGTAACCCAATTTCTTTTCCCGACATACCAATGGATCTCTTGCCAAACTCCATTTCTACTTCAACTTCTTCTGATGAAACATTCCAAGGAAGGTGCAAGCGGAAGAGGAATTGGAATGACTTCTTTGAGAGAATAATGAAAGAGGTGATTGAAAAGCAGGAGGAGCTCCAAGGGAGGTTCTTGGAAGCCATAGAGAAGCGGGAGCAAGAACAGTCAGCTAGAGAAGATGCGTGGAGGATGCAAGAGATGCAAAGGATCAATAGTGAAAGGGAAATGCTAGCACAAGAAAGATCCATGGCTGCTGTAAAAGATGCAGCCTTAATTGCTTTCTTTCAGAAAATAGCTGAACAACAAAATCTTGGGCAAGCCTTGAATAACATTACTATTTCATCACAACAACATGCGCCACCGGCAACTACACCAGCGGCTGTGCCAACACCAGCACTAGCACTAACGTCCGTGCAGCAACCAACACAGTTTCCACAGGCTGCACCTGTGCCTGTACCAGCACAGACATTAATGCAGCCTATGGGAACATTGGTATTGGCCCCACAACATGAGCAACAGCAACAAGTGAGTAACATTGAAATTGTGAAAGCTGATAATGGTGATAATATGATAAGAACAAGTTCTCCCAGGTGGCCAAAAGTGGAAATTTTGGCACTGATAAAGCTGAGAACAAGCCTGGATGAGAAGTACCAGGAAAATGGACCAAAGGGGGCACTATGGGAAGAGATATCATCCTTGATGAGGAAGAATGGGTACAACCGAAGTGCCAAAAGGTGCAAAGAGAAGTGGGAGAACATCAACAAGTATTACAAGAAAGTGAGAGAAAGCAATAAGAAGAGGCCAGAAGATTCCAAGACTTGTCCATATTATCACGAGCTGGATGCTCTATACAGGGAAAGGAGAAATGTACAGAACTCAATGAAGCAAGAGAGCACGATGCTGCCGCTCATGGTGCAGCCGGAGCAGCAATGGCCTCCTCAGCAGCCACCGCCTATAGCCCTACCGGACCTGATTCAGGAATATGCGCAGAATGACCCCATTGACAACCAGCACCACGATGAGGAAGATAATAATGAAGATGACAAGAACATGCATGATGATGAAGGTGAAGAGGATGATGAAGGTGATAAATATGAGATAGTGGCAAGCAAGTCAGATTCAGCGGGTGCATCTACTGAGTGA 2040 0.448 MLGDSALLGTGGGGGGGNSGDAVAAIVSAAVASAVAVAGSAHEGGSDTAPGGDGGGGGGSISGDDDKGRGEEGDRSFGGNRWPRQETLALLKIRSDMDVAFRGSSVKGPLWEEVSRKLAELGYHRNSKKCKEKFENVYKYHKRTKEGRSGKSFGKTYRFFDQLQALEGNNQPAKTTSIPPQTTAPLQVTPVSMVVTASSLPQQIPNTTTTIPVFAASKTTNLNSVSVPFSHANIVPSTTTLPISATTPSINLTIPSFPPPNNPTHFKPSSTINPTSNPSHVNNSNPISFPDIPMDLLPNSISTSTSSDETFQGRCKRKRNWNDFFERIMKEVIEKQEELQGRFLEAIEKREQEQSAREDAWRMQEMQRINSEREMLAQERSMAAVKDAALIAFFQKIAEQQNLGQALNNITISSQQHAPPATTPAAVPTPALALTSVQQPTQFPQAAPVPVPAQTLMQPMGTLVLAPQHEQQQQVSNIEIVKADNGDNMIRTSSPRWPKVEILALIKLRTSLDEKYQENGPKGALWEEISSLMRKNGYNRSAKRCKEKWENINKYYKKVRESNKKRPEDSKTCPYYHELDALYRERRNVQNSMKQESTMLPLMVQPEQQWPPQQPPPIALPDLIQEYAQNDPIDNQHHDEEDNNEDDKNMHDDEGEEDDEGDKYEIVASKSDSAGASTE 679
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal2g0982 679 Gene3D - 497 558 - -
Lal2g0982 679 Gene3D - 82 143 - -
Lal2g0982 679 CDD GT1 80 145 - -
Lal2g0982 679 MobiDBLite consensus disorder prediction 1 20 - -
Lal2g0982 679 ProSiteProfiles Myb-like domain profile. 80 138 IPR001005 -
Lal2g0982 679 MobiDBLite consensus disorder prediction 607 679 - -
Lal2g0982 679 PANTHER DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 32 670 - -
Lal2g0982 679 CDD GT1 495 560 - -
Lal2g0982 679 MobiDBLite consensus disorder prediction 64 79 - -
Lal2g0982 679 SMART sant 493 555 IPR001005 -
Lal2g0982 679 SMART sant 78 140 IPR001005 -
Lal2g0982 679 PANTHER - 32 670 - -
Lal2g0982 679 MobiDBLite consensus disorder prediction 38 81 - -
Lal2g0982 679 ProSiteProfiles Myb-like domain profile. 496 553 IPR001005 -
Lal2g0982 679 Pfam Myb/SANT-like DNA-binding domain 80 166 IPR044822 -
Lal2g0982 679 Pfam Myb/SANT-like DNA-binding domain 495 582 IPR044822 -
Lal2g0982 679 MobiDBLite consensus disorder prediction 646 662 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal2g0982 Lal-Chr2 6660245 6663784 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal2g0982 78 609 Trihelix Transcription Factor Family AT1G76890 44.809 4.64e-129 392
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Lal2g0982 Myb_DNA-bind_4 3.8e-22 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal2g0982 - - lang:109354958 811.216
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal2g0982 2 6660245 6663784 Lal2g0982 2 6660245 6663784 ECH
Lal2g0982 2 6660245 6663784 Lal9g0869 9 6497164 6501127 LSH
Lal2g0982 2 6660245 6663784 Lal12g0087 12 592010 595471 PCT
Lal2g0982 2 6660245 6663784 Lal24g0073 24 456264 459306 PCT
Lal12g0087 12 592010 595471 Lal2g0982 2 6660245 6663784 PCT
Lal24g0073 24 456264 459306 Lal2g0982 2 6660245 6663784 PCT