Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal2g0981 ATGGAAGGGAATTTGTCACAAGGAGGTATGATTCAAGGTGGGACTTCTTTCGGTGGCTTTGATTTCCCTGAACCAATGTGGCTTCATTGTTTAGCAAATAATCCAAATACCATGAACCAACATCAAACTCATCCTTGTGGAGGGTCTTCATTGCATCCCTCAATTAACGAGGATTTTCCGCTTGCATTGGAAACCTTGCCGAACTGTGACCAGACTATGTCAATAACGAAGTTTAGCAAGGGGGATATAAGCAGAAACTCATCAAGTGATGAAGATGAGCCAAGCTTTAATGATGGCGACGGTGAAGGTCATCATGATGCGGGTAGAGGGAAAACGGGGTCAACTTGGCAGCGGATGAAGTGGACTGACAAGATGGTGAGGCTTATGATAACAGCTGTTTCTTACATAGGCGAGGACACAACTTCTGATTATGGTAGCGGAAGAAGAAAATTTGCAGTCATACAGAAAAAGGGTAAGTGGAAATGTATTTCTAAGGTCATGGCTGAAAGGGGTTATCATGTTTCACCTCAGCAATGCGAGGATAAATTCAACGACCTTAATAAAAGGTATAAAAAACTTAATGATATGCTTGGTAGGGGCACTTCTTGTCAGGTTGTTGAAAATCCTGCGCTGTTGGATGTGATAAATTATCTTACCGAGAAAGAAAAGGACGATGTTCGCAAAATATTAAGCTCAAAACAACTGTTTTATGAAGAGATGTGTTCTTACAATAATAAAAATAGATTGCACTTACCCCATGATCCTGCATTGCAATGCTCACTACAGGCAGTTCTCAGAAATAATGATGATATCAGAAGGTCCAATCATGATGAAGACGATGAAGATATGGAAACTGAAGATCAAGACTTTAAAGATAACTATGCTTCCCATGGAGATAGTAGAAGAATGCATAACCCACTAGGAGGAGCTATGAATAAATTGAGACAAGGGCAAGGCCAAGACGATGCTACTACTTATGTGGATTCTTTAAACTGTCAGGAGCACACAAAAAATTTATATCCCCATGGACAGATGGAGGTCCAGTCTGACATGAATCAAGCTTTACATGAAGGCGCGAGAGCAACTTGGTTACAACAGAAGCGATGGATTGAATCTCGCTCACTTCAGTTAGAAGAACAGAAGCTACAAATTCAGGTTGACATGTTGGAACTAGAGAAACAGAGATATAAGTGGCAGAAGTTCAGTCAGAAAAAAGACCGACAGTTGGAGAAGTTGCGAATGGAGAATGAAAGAATGAAACATGAAAATGAACTTATTGCTTTAGAGCTGAAGCGAAAGGAAATGGACGCCGACTTTAATTAG 1323 0.4051 MEGNLSQGGMIQGGTSFGGFDFPEPMWLHCLANNPNTMNQHQTHPCGGSSLHPSINEDFPLALETLPNCDQTMSITKFSKGDISRNSSSDEDEPSFNDGDGEGHHDAGRGKTGSTWQRMKWTDKMVRLMITAVSYIGEDTTSDYGSGRRKFAVIQKKGKWKCISKVMAERGYHVSPQQCEDKFNDLNKRYKKLNDMLGRGTSCQVVENPALLDVINYLTEKEKDDVRKILSSKQLFYEEMCSYNNKNRLHLPHDPALQCSLQAVLRNNDDIRRSNHDEDDEDMETEDQDFKDNYASHGDSRRMHNPLGGAMNKLRQGQGQDDATTYVDSLNCQEHTKNLYPHGQMEVQSDMNQALHEGARATWLQQKRWIESRSLQLEEQKLQIQVDMLELEKQRYKWQKFSQKKDRQLEKLRMENERMKHENELIALELKRKEMDADFN 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal2g0981 440 Coils Coil 372 399 - -
Lal2g0981 440 Pfam Myb/SANT-like DNA-binding domain 118 243 IPR044822 -
Lal2g0981 440 Gene3D - 121 192 - -
Lal2g0981 440 MobiDBLite consensus disorder prediction 84 111 - -
Lal2g0981 440 Coils Coil 402 438 - -
Lal2g0981 440 MobiDBLite consensus disorder prediction 80 116 - -
Lal2g0981 440 PANTHER F16F4.11 PROTEIN-RELATED 1 440 - -
Lal2g0981 440 PANTHER FACTOR, PUTATIVE-RELATED 1 440 - -
Lal2g0981 440 MobiDBLite consensus disorder prediction 271 322 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal2g0981 Lal-Chr2 6629912 6635667 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Lal2g0981 Myb_DNA-bind_4 3.3e-23 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal2g0981 - - gmx:100812134 634.795
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal2g0981 2 6629912 6635667 Lal2g0981 2 6629912 6635667 ECH
Lal2g0981 2 6629912 6635667 Lal9g0861 9 6384814 6388393 LSH
Lal2g0981 2 6629912 6635667 Lal12g0086 12 588091 589036 PCT
Lal2g0981 2 6629912 6635667 Lal24g0071 24 438591 441682 PCT
Lal12g0086 12 588091 589036 Lal2g0981 2 6629912 6635667 PCT
Lal24g0071 24 438591 441682 Lal2g0981 2 6629912 6635667 PCT