Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal2g0965 ATGGAACAGAAGAACGTTCTGTTGTCAGCATTGAGTGTTGGGGTTGGGTTGGGTGTGGGGCTTGGATTGAGTTCAGGTCAGAAATGGGTTGGAGGGAGTGGTGATTATGATGAGATTTCTGAGGAGCAGATTGTAGTGGAGCTCAAAAATCATGTGGTTGATGGGAAAGATAGCAAAGTTACATTTGATCACTTTCCTTATTACTTAAGCGAAAGAACTCGAGCTTTGATGTCAAGTGCTGCATATGTTCATTTGAAAAGTCAAGACTTCTCCAAGCACACCCGAAACCTCTCACCAGCGAGCAGGGCTATTTTGCTCTCTGGTCCTACAGAAATTTACCAGCAATCGCTTGCCAAAGCTTTAGCACATTGCTTTGAATCGAAGTTGCTGTTGCTAGATATTACAGACTTCTCCTTGAAGATTCGGCGTAAATATGGGTGTTCAAGAAAAGAACCATCTTTTAGAAGGTCCAAATCTGAGGTGACTTTGGAGCGAATGTCTGGCTTGTTTGGTTCCTTTTCCATCCTCCCTTCAACCGGCGAAACTAGAGCTCCTTTAAAGCACACAAACATCTTGTGTTTTGACGAAAAGGTCTTCGTGCAGTCACTTTACAAGCTCAGATTTGAATTGTATCAAGGAACAACCTTTGCTGCCAAGGTTATAGTTTCTATCTCAAAAATTGGTTCCATCATTTTATACATTAGGGATGTTGAGAAACTCATTCTCCAATCACCAAGGTTATACAATTTATTACAAAAAATGATAAAGAAACTTTCAGGCTCCGTGTTAATACTCGGTTCCCAGATAGTAGATTCACAAGATGATTGCAAAGAAATTGATGAAAGGCTCAACATGTTATTCCCTTACAACATTGAGATCAAACTCCCAGAAGATGAAGCTCATCTTGGCAGTTATAAAGCCCAATTTGACACGTTTCAACTTCAATTTCGAGATAATAGAAACCACATCGCAAAAGTACTTGAAGCAAATGACATTGACTGTGATGTCCCGACTTCAATATGCCATGCAGACACTACGATACTAAGTAATTATATTCAAGAAATTGTGGTATCTGCAATATCTTACCATTTGATGAATACCAAGGATCCAGAATACCGTAATGGAAAGCTAATTATATCAGCCAAGAGTTTGTCCTATGCATTGAATCTGTTCCAGAGTGACAACCAAGCACCTGAAAACAAAAATGAGACGGAGAAGTCTATCCCTGTGACGAAGAAAGATGCTGAGAATCCTGCTCCAGCAAAATCAGAAGTTCCTGACAATGAGTTTGAGAAACGCATAAGAGCAGAGGTTATCCCCGCAAACGAGATAGGGGTTACATTTGCAGATATTGGATCATTGGATGATATTAAAGAATCACTTCAAGAGTTGGTCATGCTTCCCCTTAGAAGACCAGACCTCTTTAAAGGTGGCCTTCTAAATCCATGCAGAGGCATATTGCTTTTTGGACCACCTGGTACTGGAAAAACAATGCTAGCAAAGGCAATTGCAAATGAAGCTGGAGCAAGTTTCATTAATGTCTCAATGTCCACCATCACTTCAAAATTGTTTGGCGAAGTTGAAAAGAATGTTCGAGCCCTGTTCACACTAGCAGCGAAGGTTGCCCCAACTATTATCTTTGTCGATGAGGTTGACAGCATGCTTGGCCAGCGGACTATTGGAGAGCACGAGTGCATGCGGAGGATTAAAAATGAATTCATGACCCACTGGGATGGGCTATTAACAAGACCTGGTGAGCAAATTCTGGTTCTTGCTGCTACAAACAGACCATTTGACCTTGATGAAGCAATTATAAGACGATTTGAGCGCAGGATAATGGTTGGTCTTCCATCTGCTGAGAACAGGGAAATGATCCTAAAAACTCTTCTAGCTAAGGAAAAACATGAAAACTTAGACTTCAAGGAACTCGCAACCATGACAGAAGGATTTAGTGGAAGTGATCTTAAGAATTTGTGCATCACTGCGGCTTATCGACCCGTTAGGGAGCTAATAGAGCAGGAGAGAAGGAAGGACATGAAAAAGAAGAAGAAAGAACCACAAGGCCAAGACTCTGAAGATTCTTCGAGCAAAGAAGAAGATAAAGAAGATCTAGAAATTATGCTTAGGCCATTAAATATGGAAGACATGAGACATGCTAAGAGTCAGGTCGCTGCAAGTTTTGCCTCGGAAGGAGCAGTAATGGGTGAACTGAAGCAGTGGAATGATTTGTATGGAGAAGGAGGTTCAAGGAAGAAAGAACAGCTCACCTACTTCGTTTAG 2280 0.4123 MEQKNVLLSALSVGVGLGVGLGLSSGQKWVGGSGDYDEISEEQIVVELKNHVVDGKDSKVTFDHFPYYLSERTRALMSSAAYVHLKSQDFSKHTRNLSPASRAILLSGPTEIYQQSLAKALAHCFESKLLLLDITDFSLKIRRKYGCSRKEPSFRRSKSEVTLERMSGLFGSFSILPSTGETRAPLKHTNILCFDEKVFVQSLYKLRFELYQGTTFAAKVIVSISKIGSIILYIRDVEKLILQSPRLYNLLQKMIKKLSGSVLILGSQIVDSQDDCKEIDERLNMLFPYNIEIKLPEDEAHLGSYKAQFDTFQLQFRDNRNHIAKVLEANDIDCDVPTSICHADTTILSNYIQEIVVSAISYHLMNTKDPEYRNGKLIISAKSLSYALNLFQSDNQAPENKNETEKSIPVTKKDAENPAPAKSEVPDNEFEKRIRAEVIPANEIGVTFADIGSLDDIKESLQELVMLPLRRPDLFKGGLLNPCRGILLFGPPGTGKTMLAKAIANEAGASFINVSMSTITSKLFGEVEKNVRALFTLAAKVAPTIIFVDEVDSMLGQRTIGEHECMRRIKNEFMTHWDGLLTRPGEQILVLAATNRPFDLDEAIIRRFERRIMVGLPSAENREMILKTLLAKEKHENLDFKELATMTEGFSGSDLKNLCITAAYRPVRELIEQERRKDMKKKKKEPQGQDSEDSSSKEEDKEDLEIMLRPLNMEDMRHAKSQVAASFASEGAVMGELKQWNDLYGEGGSRKKEQLTYFV 759
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal2g0965 759 MobiDBLite consensus disorder prediction 675 703 - -
Lal2g0965 759 Pfam AAA+ lid domain 637 680 IPR041569 -
Lal2g0965 759 Pfam ATPase family associated with various cellular activities (AAA) 486 615 IPR003959 GO:0005524|GO:0016887
Lal2g0965 759 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 187 759 - -
Lal2g0965 759 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 1 188 - -
Lal2g0965 759 CDD AAA 484 616 - -
Lal2g0965 759 MobiDBLite consensus disorder prediction 395 427 - -
Lal2g0965 759 PANTHER P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASES SUPERFAMILY PROTEIN 187 759 - -
Lal2g0965 759 PANTHER P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASES SUPERFAMILY PROTEIN 1 188 - -
Lal2g0965 759 Gene3D - 445 616 IPR027417 -
Lal2g0965 759 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 446 709 IPR027417 -
Lal2g0965 759 Gene3D - 617 687 - -
Lal2g0965 759 ProSitePatterns AAA-protein family signature. 588 607 IPR003960 GO:0005524|GO:0016887
Lal2g0965 759 SMART AAA_5 482 618 IPR003593 -
Lal2g0965 759 MobiDBLite consensus disorder prediction 399 427 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal2g0965 Lal-Chr2 6483802 6488937 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal2g0965 446 674 Calmodulin-binding Proteins AT3G56690 40.000 2.82e-40 157
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal2g0965 - - gmx:100817952 1148.27
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal2g0965 2 6483802 6488937 Lal2g0965 2 6483802 6488937 ECH