Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal2g0952 ATGAAAAGAAAAAGCCAACAAAAGAAAATAGTGTGCCCTGTAACCGCTGATAACCTTTCATTATATTTATGGGCATGGAGAAAATATGGACAAAAACCCATAAAGGGTTCTCCATATCCAAGGAACCATTATAGATGCAGTAGCTGCAAAGGATGTGCAGCGAGAAAGCAAGTAGAGCGAAGCACAACGGAACCCAAAATGTTCATTCTCACTTACACCGGAGAACACAAGCACCCCAAACCGGCTCACCGGAGCTCCATCGCCGGAAGTACCCGGAACAAGTCATCCACGACTCAAATACCCGAAGCACAAGAAAATGGGTCCTCCTCTAGTATGGAGGTTGTTTCTCCCACAGAGACATTTACAACATCAATGTTTGCGAATATGAACGGCGAGGAACCAGAATCGGAATCTGAGTCCGACGATGAGGATGTTCTGATACCAAATTCAATGGGACATTTGGAGGCTGTGTTGTTGAGTGAGTATACTCTCGAGTAA 498 0.4478 MKRKSQQKKIVCPVTADNLSLYLWAWRKYGQKPIKGSPYPRNHYRCSSCKGCAARKQVERSTTEPKMFILTYTGEHKHPKPAHRSSIAGSTRNKSSTTQIPEAQENGSSSSMEVVSPTETFTTSMFANMNGEEPESESESDDEDVLIPNSMGHLEAVLLSEYTLE 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal2g0952 165 Pfam WRKY DNA -binding domain 24 79 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lal2g0952 165 SUPERFAMILY WRKY DNA-binding domain 24 81 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lal2g0952 165 MobiDBLite consensus disorder prediction 86 133 - -
Lal2g0952 165 Gene3D WRKY domain 14 82 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lal2g0952 165 ProSiteProfiles WRKY domain profile. 15 81 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lal2g0952 165 PANTHER WRKY TRANSCRIPTION FACTOR 27-RELATED 2 151 - -
Lal2g0952 165 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 2 151 IPR044810 GO:0003700
Lal2g0952 165 MobiDBLite consensus disorder prediction 72 149 - -
Lal2g0952 165 SMART WRKY_cls 23 80 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal2g0952 Lal-Chr2 6378966 6380798 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal2g0952 2 95 WRKY Transcription Factor Family AT5G52830 75.532 8.68e-50 161
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lal2g0952 WRKY 1.3e-22 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal2g0952 K13425 - aprc:113866622 199.134
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal6g0997 6 7112653 7114535 Lal2g0952 2 6378966 6380798 ECH
Lal22g0891 22 6973640 6975543 Lal2g0952 2 6378966 6380798 ECH
Lal16g1186 16 8155791 8157557 Lal2g0952 2 6378966 6380798 ECH
Lal2g0952 2 6378966 6380798 Lal2g0952 2 6378966 6380798 ECH
Lal2g0952 2 6378966 6380798 Lal9g0840 9 6133025 6134809 LSH